RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 AFMIDQ63HM1 303 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 PCDH19Q8TAB3 1148 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 HIC2Q96JB3 615 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 MYO1AQ9UBC5 1043 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 GPR34Q9UPC5 381 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 ENTPD2Q9Y5L3 495 aa23.21■■□□□ 1.31
HMG20B-201ENST00000262949 H3BRJ5 948 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 SERPINC1P01008 464 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 KELP23276 732 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 RGRP47804 291 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 ZNF165P49910 485 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 AP1S1P61966 158 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 TCEA2Q15560 299 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 FOXR1Q6PIV2 292 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 IGF2-ASQ6U949 168 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 ARHGAP12Q8IWW6 846 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 ARL14Q8N4G2 192 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 LSM14AQ8ND56 463 aaKnown RBP23.2■■□□□ 1.3
HMG20B-201ENST00000262949 OR6C4Q8NGE1 309 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 SLC39A7Q92504 469 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 DPH1Q9BZG8 443 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 CWC15Q9P013 229 aaKnown RBP23.2■■□□□ 1.3
HMG20B-201ENST00000262949 TMEM63CQ9P1W3 806 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 PCDHGA8Q9Y5G5 932 aa23.2■■□□□ 1.3
HMG20B-201ENST00000262949 SMG1Q96Q15 3661 aaKnown RBP23.2■■□□□ 1.3
HMG20B-201ENST00000262949 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ATXN7O15265 892 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 LRCH4O75427 683 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 RECQL5O94762 991 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 CELA2BP08218 269 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 NFKBIAP25963 317 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 PCK1P35558 622 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 TMPRSS3P57727 454 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ZNF235Q14590 738 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 LBRQ14739 615 aaKnown RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 TMCO4Q5TGY1 634 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ZSWIM9Q86XI8 627 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 BBS5Q8N3I7 341 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 NPWQ8N729 165 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 WDR36Q8NI36 951 aaKnown RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ECHDC3Q96DC8 303 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 CCDC97Q96F63 343 aaPredicted RBP23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ZNF599Q96NL3 588 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 SLC46A1Q96NT5 459 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 TRIM7Q9C029 511 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 ASCL3Q9NQ33 180 aa23.19■■□□□ 1.3
HMG20B-201ENST00000262949 SHROOM3Q8TF72 1996 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 A0A1B0GTH6 734 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 A0A1W2PQ67 120 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 TMX2-CTNND1H3BSU7 103 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 DDX3XO00571 662 aaKnown RBP eCLIP23.18■■□□□ 1.33e-10■■□□□ 11.4
HMG20B-201ENST00000262949 KLK10O43240 276 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 C19orf57Q0VDD7 668 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 BOLA3Q53S33 107 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 TMCO3Q6UWJ1 677 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 LIPIQ6XZB0 460 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 ARHGAP36Q6ZRI8 547 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 KYQ8NBH2 561 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 OR56A4Q8NGH8 313 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 NSMCE1Q8WV22 266 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 PSKH2Q96QS6 385 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 RP1P56715 2156 aa23.18■■□□□ 1.3
HMG20B-201ENST00000262949 SKILP12757 684 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 HSPA9P38646 679 aaKnown RBP23.17■■□□□ 1.3
HMG20B-201ENST00000262949 KIAA1024LP59773 190 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 TPM4P67936 248 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 DPYSQ14117 519 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 ACOX1Q15067 660 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 TDRD12Q587J7 1177 aaKnown RBP23.17■■□□□ 1.3
HMG20B-201ENST00000262949 DPPA4Q7L190 304 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 TAF8Q7Z7C8 310 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 CCDC74AQ96AQ1 378 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 GFM1Q96RP9 751 aaKnown RBP23.17■■□□□ 1.3
HMG20B-201ENST00000262949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.17■■□□□ 1.3
HMG20B-201ENST00000262949 DGKBQ9Y6T7 804 aa23.17■■□□□ 1.3
HMG20B-201ENST00000262949 CCDC187A0A096LP49 1063 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 PDE2AO00408 941 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 MLLT3P42568 568 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 RALGDSQ12967 914 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 PIGHQ14442 188 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 CAVIN1Q6NZI2 390 aaKnown RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 CYP4V2Q6ZWL3 525 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 PLA2G15Q8NCC3 412 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 PDCD6IPQ8WUM4 868 aaKnown RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 HSPH1Q92598 858 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 NAP1L5Q96NT1 182 aaPredicted RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 RBM15Q96T37 977 aaKnown RBP eCLIP23.16■■□□□ 1.33e-7■□□□□ 10.4
HMG20B-201ENST00000262949 STRADBQ9C0K7 418 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 ISCUQ9H1K1 167 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 KCTD5Q9NXV2 234 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 MOSPD1Q9UJG1 213 aa23.16■■□□□ 1.3
HMG20B-201ENST00000262949 BZW2Q9Y6E2 419 aaKnown RBP23.16■■□□□ 1.3
HMG20B-201ENST00000262949 A8MX80 341 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 TRAFD1O14545 582 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-201ENST00000262949 TNFRSF10CO14798 259 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 HOXC4P09017 264 aaPredicted RBP23.15■■□□□ 1.3
HMG20B-201ENST00000262949 SERPINB6P35237 376 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 SLC10A7Q0GE19 358 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 DPYSL2Q16555 572 aa23.15■■□□□ 1.3
HMG20B-201ENST00000262949 SMTNL2Q2TAL5 461 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms