RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TMEM121Q9BTD3 319 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 GPR174Q9BXC1 333 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 POLR1EQ9GZS1 481 aaKnown RBP11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SUV39H2Q9H5I1 410 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 SGK2Q9HBY8 427 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PCDH9Q9HC56 1237 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 DYRK4Q9NR20 520 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 PAK5Q9P286 719 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TRHDEQ9UKU6 1024 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 TTLL3Q9Y4R7 772 aa11.67□□□□□ -0.54
PFDN1-201ENST00000261813 CACNA1AO00555 2505 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 TSPAN11A1L157 253 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 C10orf142B7Z368 130 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 KCNN4O15554 427 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 SLC7A4O43246 635 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 PLRG1O43660 514 aaKnown RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 NDUFS2O75306 463 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ERLIN1O75477 346 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 GCATO75600 419 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 SEMA4FO95754 770 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 AVPP01185 164 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ADRB3P13945 408 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ITIH2P19823 946 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ADCY8P40145 1251 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ABL2P42684 1182 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 MAPK8P45983 427 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 NEK3P51956 506 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 BCL2L1Q07817 233 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 CALCOCO2Q13137 446 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 GRM3Q14832 879 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 MAP9Q49MG5 647 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 TEX44Q53QW1 395 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 RALGPS1Q5JS13 557 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 CEP128Q6ZU80 1094 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 SLC41A1Q8IVJ1 513 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 LRRN4CLQ8ND94 238 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 OR14C36Q8NHC7 312 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 SEC14L1Q92503 715 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ECHDC3Q96DC8 303 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ZNF641Q96N77 438 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 TSPYL1Q9H0U9 437 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 C6orf106Q9H6K1 298 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 USP29Q9HBJ7 922 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 EPB41L5Q9HCM4 733 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ARGLU1Q9NWB6 273 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 DKK3Q9UBP4 350 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 SMG5Q9UPR3 1016 aaKnown RBP11.66□□□□□ -0.54
PFDN1-201ENST00000261813 PCDHGC4Q9Y5F7 938 aa11.66□□□□□ -0.54
PFDN1-201ENST00000261813 DCHS1Q96JQ0 3298 aa11.65□□□□□ -0.54
PFDN1-201ENST00000261813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.65□□□□□ -0.55
PFDN1-201ENST00000261813 UQCRHLA0A096LP55 91 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.65□□□□□ -0.55
PFDN1-201ENST00000261813 MED19A0JLT2 244 aaPredicted RBP11.65□□□□□ -0.55
PFDN1-201ENST00000261813 SPINT1O43278 529 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 HTRA2O43464 458 aaPredicted RBP11.65□□□□□ -0.55
PFDN1-201ENST00000261813 OPHN1O60890 802 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 NEBLO76041 1014 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 IFNB1P01574 187 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 UQCRHP07919 91 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 MMP2P08253 660 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 TIMP2P16035 220 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 SDHBP21912 280 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 TNFRSF8P28908 595 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 SERPINA4P29622 427 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 CD68P34810 354 aaPredicted RBP11.65□□□□□ -0.55
PFDN1-201ENST00000261813 PTGER3P43115 390 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 GUCY2DQ02846 1103 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 TRAF2Q12933 501 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 ELF2Q15723 593 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 LINC01559Q495D7 138 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 LRRC73Q5JTD7 316 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 DUPD1Q68J44 220 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 ITPRIPL1Q6GPH6 555 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 ARMCX6Q7L4S7 300 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 LPCAT2Q7L5N7 544 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 ZNF567Q8N184 647 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 FAM71DQ8N9W8 422 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 OR2T34Q8NGX1 318 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 HCAR2Q8TDS4 363 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 SNF8Q96H20 258 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 TEKT5Q96M29 485 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 HSPA12BQ96MM6 686 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 GDF3Q9NR23 364 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 WHRNQ9P202 907 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 GGT7Q9UJ14 662 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 NEU2Q9Y3R4 380 aa11.65□□□□□ -0.55
PFDN1-201ENST00000261813 EP300Q09472 2414 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GOLGA6CA6NDK9 693 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 GOLGA6BA6NDN3 693 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 FAM47DPA6NHR8 397 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 LRRC72A6NJI9 287 aa11.64□□□□□ -0.55
PFDN1-201ENST00000261813 METTL12A8MUP2 240 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms