RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 ZNF470Q6ECI4 717 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 NECAB2Q7Z6G3 386 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 DPP10Q8N608 796 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 C15orf40Q8WUR7 153 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CAMKK2Q96RR4 588 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ARPC5LQ9BPX5 153 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SH2D3AQ9BRG2 576 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ITPAQ9BY32 194 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PTTG3PQ9NZH4 202 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PKP3Q9Y446 797 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 LRP6O75581 1613 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 RNF225M0QZC1 329 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 AP1G1O43747 822 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PLOD3O60568 738 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CPNE3O75131 537 aaKnown RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 KLHL18O94889 574 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 IGFBP5P24593 272 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 EEFSECP57772 596 aaKnown RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CYP24A1Q07973 514 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ACOX1Q15067 660 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SMTNL2Q2TAL5 461 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 XKR3Q5GH77 459 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 REP15Q6BDI9 236 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 OR5T2Q8NGG2 359 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ALG3Q92685 438 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CERS2Q96G23 380 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 HYLS1Q96M11 299 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 C12orf66Q96MD2 445 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 KCTD10Q9H3F6 313 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CHMP1AQ9HD42 196 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 BLOC1S4Q9NUP1 217 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 MAGED1Q9Y5V3 778 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SNX8Q9Y5X2 465 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PHLPP1O60346 1717 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 FADS2O95864 444 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 RAP2AP10114 183 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 NR4A1P22736 598 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 ALDH1B1P30837 517 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PPM1FP49593 454 aaPredicted RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 HLCSP50747 726 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 CDC42EP1Q00587 391 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 KHDRBS2Q5VWX1 349 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 ZYG11AQ6WRX3 759 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 C16orf86Q6ZW13 317 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 C10orf107Q8IVU9 208 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 FAM109AQ8N4B1 249 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 MID1IP1Q9NPA3 183 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 C4AP0C0L4 1744 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 C4BP0C0L5 1744 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PLOD2O00469 737 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 EPHB6O15197 1021 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 DLGAP5Q15398 846 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 STXBP2Q15833 593 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 LDLRAP1Q5SW96 308 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 FNBP1LQ5T0N5 605 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 TIGD4Q8IY51 512 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 VANGL1Q8TAA9 524 aaPredicted RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 GSDMCQ9BYG8 508 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 ERVK-5Q9HDB9 667 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 RDH8Q9NYR8 311 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 GGA3Q9NZ52 723 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 NOD1Q9Y239 953 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 SLITRK5O94991 958 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 CYP19A1P11511 503 aaPredicted RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 JAM2P57087 298 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 SELPLGQ14242 412 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 CSHL1Q14406 222 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 TMEM44Q2T9K0 475 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 OFCC1Q8IZS5 231 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 FBXO39Q8N4B4 442 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 TBC1D19Q8N5T2 526 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 FNDC5Q8NAU1 212 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PJA1Q8NG27 643 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 DCSTAMPQ9H295 470 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 NDFIP2Q9NV92 336 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PNPOQ9NVS9 261 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 IRAK3Q9Y616 596 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 LRP5O75197 1615 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 DOCK2Q92608 1830 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 A0A0A0MRY4 1105 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PRAMEF33A0A0G2JMD5 474 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PRAMEF10O60809 474 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 MAZP56270 477 aaKnown RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 RAB2AP61019 212 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 RAB5BP61020 215 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC18A2Q05940 514 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 STX4Q12846 297 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 E2F2Q14209 437 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 NKX1-1Q15270 411 aaPredicted RBP8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 STRIP1Q5VSL9 837 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 IL23RQ5VWK5 629 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 PNCKQ6P2M8 343 aa8.35□□□□□ -1.07
SNCAIP-201ENST00000261367 TREML1Q86YW5 311 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms