RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SPATC1LQ9H0A9 340 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 MRPL40Q9NQ50 206 aaKnown RBP15.98■□□□□ 0.15
LMNB1-201ENST00000261366 TBCCD1Q9NVR7 557 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 GTF2IRD1Q9UHL9 959 aa15.98■□□□□ 0.15
LMNB1-201ENST00000261366 ADAM23O75077 832 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CBFA2T3O75081 653 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CYP2C8P10632 490 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 YBX3P16989 372 aaKnown RBP eCLIP15.97■□□□□ 0.153e-9■□□□□ 10.7
LMNB1-201ENST00000261366 MATN1P21941 496 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 PSMA4P25789 261 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 BTBD8Q5XKL5 378 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 NAPEPLDQ6IQ20 393 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 LBX2Q6XYB7 198 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 TTC39CQ8N584 583 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 SH3RF2Q8TEC5 729 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 KCNA7Q96RP8 456 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 MRPL57Q9BQC6 102 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ELP3Q9H9T3 547 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 PLEKHA5Q9HAU0 1116 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 BTRCQ9Y297 605 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 RLFQ13129 1914 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 BRCA1P38398 1863 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 DOCK1Q14185 1865 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 KANSL1LA0AUZ9 987 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 H0YJX3 145 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 NOL3O60936 208 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 BMP2P12643 396 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CPB1P15086 417 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 EDNRBP24530 442 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ARNTP27540 789 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 TRAP1Q12931 704 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 BFSP2Q13515 415 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ZNF829Q3KNS6 432 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 RABL3Q5HYI8 236 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 HABP4Q5JVS0 413 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 NOL9Q5SY16 702 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ANKRD49Q8WVL7 239 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 NPY6RQ99463 290 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ULBP1Q9BZM6 244 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 FANCEQ9HB96 536 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ERAP1Q9NZ08 941 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 RCOR3Q9P2K3 495 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ZNHIT2Q9UHR6 403 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 MAGEB16A2A368 324 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 H3BMM5 538 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 NPHS1O60500 1241 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 SERPINB7O75635 380 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 IPO13O94829 963 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 SIX3O95343 332 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 USP17L7P0C7H9 530 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CD151P48509 253 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 KCNC1P48547 511 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 FBXO47Q5MNV8 452 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 C9orf57Q5W0N0 161 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ANKRD26P1Q6NSI1 321 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 PDZD4Q76G19 769 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 TNIP2Q8NFZ5 429 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 VPS33AQ96AX1 596 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ABHD8Q96I13 439 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 YIPF2Q9BWQ6 316 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ADNPQ9H2P0 1102 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 LTB4R2Q9NPC1 389 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 MAP10Q9P2G4 905 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 FBXO5Q9UKT4 447 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 RBMX2Q9Y388 322 aaKnown RBP15.97■□□□□ 0.15
LMNB1-201ENST00000261366 CSADQ9Y600 493 aa15.97■□□□□ 0.15
LMNB1-201ENST00000261366 ANGPT2O15123 496 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 HUS1O60921 280 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 CAPN3P20807 821 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 MYF6P23409 242 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 HALP42357 657 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 HK2P52789 917 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PIGFQ07326 219 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 GRB7Q14451 532 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 RPS6KA2Q15349 733 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PERM1Q5SV97 790 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PKN3Q6P5Z2 889 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PIM3Q86V86 326 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 DHRSXQ8N5I4 330 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 BEST2Q8NFU1 509 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 OR52K2Q8NGK3 314 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PPP1R14BQ96C90 147 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 ZNF419Q96HQ0 510 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-201ENST00000261366 TEKT5Q96M29 485 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PPP1R10Q96QC0 940 aaKnown RBP15.96■□□□□ 0.15
LMNB1-201ENST00000261366 AKTIPQ9H8T0 292 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 CCM2LQ9NUG4 571 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-201ENST00000261366 EVLQ9UI08 416 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-201ENST00000261366 TIMM13Q9Y5L4 95 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-201ENST00000261366 PPP2R3BQ9Y5P8 575 aa15.96■□□□□ 0.15
LMNB1-201ENST00000261366 SOCS7O14512 581 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 PCNAP12004 261 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 ACADSBP45954 432 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 BCAP31P51572 246 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 PRKAA2P54646 552 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 PLIN5Q00G26 463 aa15.96■□□□□ 0.14
LMNB1-201ENST00000261366 INPP5AQ14642 412 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms