RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 SRP54P61011 504 aaKnown RBP16.97■□□□□ 0.31
CGREF1-201ENST00000260595 AP1S1P61966 158 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 TLE3Q04726 772 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 CCDC173Q0VFZ6 552 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 LBRQ14739 615 aaKnown RBP16.97■□□□□ 0.31
CGREF1-201ENST00000260595 ELOCQ15369 112 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 SMTNL2Q2TAL5 461 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 TMCO4Q5TGY1 634 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 TXNRD3NBQ6F5E7 133 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 DPPA4Q7L190 304 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 SPACA3Q8IXA5 215 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 NAT6Q93015 286 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 GRAMD1AQ96CP6 724 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 PRR11Q96HE9 360 aaPredicted RBP16.97■□□□□ 0.31
CGREF1-201ENST00000260595 SEPT3Q9UH03 358 aa16.97■□□□□ 0.31
CGREF1-201ENST00000260595 ASXL3Q9C0F0 2248 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 IGSF10Q6WRI0 2623 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 A0A1W2PQJ5 194 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 H3BRJ5 948 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 HTRA2O43464 458 aaPredicted RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 TCEA3O75764 348 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ALPIP09923 528 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 TRIM23P36406 574 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 RENBPP51606 427 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 PDX1P52945 283 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ERVPABLB-1P60509 514 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 POLR2LP62875 67 aaKnown RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 FANCCQ00597 558 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ESRP1Q6NXG1 681 aaKnown RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 IGF2-ASQ6U949 168 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 RBM44Q6ZP01 1051 aaKnown RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 RD3Q7Z3Z2 195 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 SDR16C5Q8N3Y7 309 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 PGBD5Q8N414 524 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ARL10Q8N8L6 244 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 PCDH19Q8TAB3 1148 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 SYN2Q92777 582 aaPredicted RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 FUBP1Q96AE4 644 aaKnown RBP16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ATXN7L3BQ96GX2 97 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 WDR92Q96MX6 357 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 CSPG4P5Q96PW8 444 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 CCDC3Q9BQI4 270 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 THAP2Q9H0W7 228 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 CBX8Q9HC52 389 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 KLQ9UEF7 1012 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 DGKBQ9Y6T7 804 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 ATRXP46100 2492 aa16.96■□□□□ 0.31
CGREF1-201ENST00000260595 TMEM202A6NGA9 273 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 NTN3O00634 580 aaPredicted RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 MAFKO60675 156 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 HOXC4P09017 264 aaPredicted RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 ELFN1P0C7U0 828 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 CTSEP14091 401 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 ARL4AP40617 200 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 KIAA1024LP59773 190 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 SLC25A11Q02978 314 aaKnown RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 PIGHQ14442 188 aaPredicted RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 TCEA2Q15560 299 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 TMCO3Q6UWJ1 677 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 PELI3Q8N2H9 469 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 NIPA2Q8N8Q9 360 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 KYQ8NBH2 561 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 ZNF248Q8NDW4 579 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 TEKT4Q8WW24 435 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 OR1E3Q8WZA6 343 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 HSPH1Q92598 858 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 PDXPQ96GD0 296 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 BTBD6Q96KE9 485 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 UBL7Q96S82 380 aaPredicted RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 RBM15Q96T37 977 aaKnown RBP eCLIP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 PCDH18Q9HCL0 1135 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 GULP1Q9UBP9 304 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 RABGEF1Q9UJ41 708 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 DOLKQ9UPQ8 538 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 SATB2Q9UPW6 733 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 PCDHGC4Q9Y5F7 938 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 BZW2Q9Y6E2 419 aaKnown RBP16.95■□□□□ 0.3
CGREF1-201ENST00000260595 LRRK1Q38SD2 2015 aa16.95■□□□□ 0.3
CGREF1-201ENST00000260595 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 PMS2P1A4D2B8 440 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 A8MX80 341 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 TNFP01375 233 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 CYP1A2P05177 515 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 IL4RP24394 825 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 PCBP4P57723 403 aaKnown RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 TDRD12Q587J7 1177 aaKnown RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 C3orf38Q5JPI3 329 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 GKN2Q86XP6 184 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 CBARPQ8N350 705 aaPredicted RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 OR56A4Q8NGH8 313 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 ATL2Q8NHH9 583 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 WDR48Q8TAF3 677 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 SCG3Q8WXD2 468 aaKnown RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 NAF1Q96HR8 494 aaKnown RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 COQ10AQ96MF6 247 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 SLC46A1Q96NT5 459 aa16.94■□□□□ 0.3
CGREF1-201ENST00000260595 FCRL3Q96P31 734 aaPredicted RBP16.94■□□□□ 0.3
CGREF1-201ENST00000260595 NUDCD1Q96RS6 583 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms