RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PRF1P14222 555 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 HDCP19113 662 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PEX2P28328 305 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ECHS1P30084 290 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NDUFA8P51970 172 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 EIF3EP60228 445 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ESRRGP62508 458 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 MPP1Q00013 466 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FOXO1Q12778 655 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 SLC9A5Q14940 896 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 LRRC14Q15048 493 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FNDC3BQ53EP0 1204 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ATAD3CQ5T2N8 411 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FAM91A1Q658Y4 838 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 XRRA1Q6P2D8 792 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 IGF2-ASQ6U949 168 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 LIPIQ6XZB0 460 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TRMT11Q7Z4G4 463 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FRMD5Q7Z6J6 570 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 NAGSQ8N159 534 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PDIK1LQ8N165 341 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZCCHC7Q8N3Z6 543 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FAM71DQ8N9W8 422 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 IL17RCQ8NAC3 791 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 OR8K5Q8NH50 307 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZHX1-C8orf76Q96EF9 292 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 SIPA1Q96FS4 1042 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 MAGED4Q96JG8 741 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ASB2Q96Q27 587 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ALX4Q9H161 411 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ESRP2Q9H6T0 727 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 RPF2Q9H7B2 306 aaKnown RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ABHD10Q9NUJ1 306 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF219Q9P2Y4 722 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 ENPP5Q9UJA9 477 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 FAM50BQ9Y247 325 aa7.78□□□□□ -1.16
GPNMB-201ENST00000258733 N4BP2Q86UW6 1770 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-201ENST00000258733 TRABD2BA6NFA1 517 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 ZBBXA8MT70 800 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 CLDN25C9JDP6 229 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 LOC110117498-PIK3R3F6TDL0 507 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 NOP56O00567 594 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 RGS5O15539 181 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 HUS1O60921 280 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 H2AFYO75367 372 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PRKRAO75569 313 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 POP7O75817 140 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SCAF4O95104 1147 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PGLSO95336 258 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 IL1BP01584 269 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 IGHV2-70P01814 119 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 GYPCP04921 128 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 GP1BAP07359 652 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SNRPA1P09661 255 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 HOXA7P31268 230 aaPredicted RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 DHPSP49366 369 aaPredicted RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 BNIP2Q12982 314 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PTGDRQ13258 359 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 HABP2Q14520 560 aaPredicted RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 GPR68Q15743 365 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 EPC2Q52LR7 807 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 KLHL26Q53HC5 615 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 FGD3Q5JSP0 725 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 CHSY3Q70JA7 882 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 KIF18BQ86Y91 864 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 FAM217AQ8IXS0 508 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 OR6F1Q8NGZ6 308 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 MOSPD2Q8NHP6 518 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SLC7A14Q8TBB6 771 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 CKAP2Q8WWK9 683 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SLC13A3Q8WWT9 602 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SEC14L1Q92503 715 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SGTBQ96EQ0 304 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 FAM161BQ96MY7 647 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 CSRNP1Q96S65 589 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 SSX3Q99909 188 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 OR51B6Q9H340 312 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 ASB7Q9H672 318 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 DNAJC17Q9NVM6 304 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 CCDC59Q9P031 241 aaKnown RBP7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PKD2L1Q9P0L9 805 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 TRHDEQ9UKU6 1024 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PCDHB10Q9UN67 800 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PCDHGB4Q9UN71 923 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 PCDHB9Q9Y5E1 797 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 FPGT-TNNI3KV9GXZ4 949 aa7.77□□□□□ -1.16
GPNMB-201ENST00000258733 ZNFX1Q9P2E3 1918 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF729A6NN14 1252 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 HACD1B0YJ81 288 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CCDC188H7C350 402 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 SNAP91O60641 907 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 NOL3O60936 208 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 TNFRSF21O75509 655 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CSDE1O75534 798 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 LDOC1O95751 146 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 IFNB1P01574 187 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 CYP2C8P10632 490 aa7.77□□□□□ -1.17
GPNMB-201ENST00000258733 OGNP20774 298 aaKnown RBP7.77□□□□□ -1.17
GPNMB-201ENST00000258733 ZNF280AP59817 542 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms