RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RHPN2Q8IUC4 686 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 LACC1Q8IV20 430 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 DCP1BQ8IZD4 617 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SYNPOQ8N3V7 929 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TBC1D16Q8TBP0 767 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ELMO1Q92556 727 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CELF1Q92879 486 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC74AQ96AQ1 378 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MIPEPQ99797 713 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF696Q9H7X3 374 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MAFBQ9Y5Q3 323 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 USP17L3A6NCW0 530 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 USP17L4A6NCW7 530 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 LAD1O00515 517 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NDUFS2O75306 463 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 PTTG1O95997 202 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CD6P30203 668 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TIE1P35590 1138 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ALCAMQ13740 583 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RNF212Q495C1 297 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 AFMIDQ63HM1 303 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ALKBH5Q6P6C2 394 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 USP17L1Q7RTZ2 530 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ADAMTSL2Q86TH1 951 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 HERC6Q8IVU3 1022 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SYNE4Q8N205 404 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SETD9Q8NE22 299 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 BPIFB1Q8TDL5 484 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 OTUB1Q96FW1 271 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZSWIM3Q96MP5 696 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ASB2Q96Q27 587 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CRAMP1Q96RY5 1269 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 PIGSQ96S52 555 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 MBD1Q9UIS9 605 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TUBE1Q9UJT0 475 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 BCS1LQ9Y276 419 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ACTL7BQ9Y614 415 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KDM3AQ9Y4C1 1321 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NFAT5O94916 1531 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF142P52746 1687 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 OR14I1A6ND48 311 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 A6NL46 340 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KRBOX1C9JBD0 128 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TCAPO15273 167 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ZBTB24O43167 697 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NUDT17P0C025 328 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC2A3P11169 496 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 COL6A2P12110 1019 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 RAB5CP51148 216 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 NME5P56597 212 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CDK10Q15131 360 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 LRIF1Q5T3J3 769 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 R3HCC1LQ7Z5L2 792 aaKnown RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CLNKQ7Z7G1 428 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 CIR1Q86X95 450 aaPredicted RBP6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 C7orf31Q8N865 590 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 DTD1Q8TEA8 209 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 GMLQ99445 158 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 ABCD2Q9UBJ2 740 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 REV1Q9UBZ9 1251 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 TLL2Q9Y6L7 1015 aa6.78□□□□□ -1.32
PDGFRA-201ENST00000257290 KLRF2D3W0D1 207 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SORBS3O60504 671 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CDC123O75794 336 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 FUCA1P04066 466 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 NR2C1P13056 603 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 EDN3P14138 238 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ERVK-24P63145 666 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CSTF1Q05048 431 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ITPK1Q13572 414 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 POU6F1Q14863 301 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 NFIXQ14938 502 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RDM1Q8NG50 284 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TCEAL4Q96EI5 215 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CSRNP1Q96S65 589 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 AGAP2Q99490 1192 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SLX1AQ9BQ83 275 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TMED9Q9BVK6 235 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CNOT8Q9UFF9 292 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CPQQ9Y646 472 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 STK36Q9NRP7 1315 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 A8MU76 341 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TCP10L2B9ZVM9 353 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAM12O43184 909 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 AQP5P55064 265 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 HADHBP55084 474 aaKnown RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 SELPLGQ14242 412 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 MESDQ14696 234 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 TBCELQ5QJ74 424 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 PRMT9Q6P2P2 845 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RFWD3Q6PCD5 774 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 KCTD8Q6ZWB6 473 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 KIAA1143Q96AT1 154 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM117AQ9C073 453 aa6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 RANBP3Q9H6Z4 567 aaPredicted RBP6.77□□□□□ -1.33
PDGFRA-201ENST00000257290 CPA4Q9UI42 421 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms