RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 ARL5AQ9Y689 179 aa9.51□□□□□ -0.89
NIP7-202ENST00000254941 A0A1W2PPM1 405 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 HMX2A2RU54 273 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 WASH3PC4AMC7 463 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 ANHXE9PGG2 379 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 GOLGA8TH3BQL2 631 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 SIN3BO75182 1162 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 PIGNO95427 931 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 BRAFP15056 766 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 KRT4P19013 534 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 PSMA3P25788 255 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 GKP32189 559 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 SLC8A1P32418 973 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 GP5P40197 560 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 OPRD1P41143 372 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 EIF2DP41214 584 aaKnown RBP9.5□□□□□ -0.89
NIP7-202ENST00000254941 RAD51Q06609 339 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 HTR4Q13639 388 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 TAF1AQ15573 450 aaPredicted RBP9.5□□□□□ -0.89
NIP7-202ENST00000254941 GRTP1Q5TC63 336 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 GLT6D1Q7Z4J2 308 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 MICALL1Q8N3F8 863 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 RYBPQ8N488 228 aaPredicted RBP9.5□□□□□ -0.89
NIP7-202ENST00000254941 TERB1Q8NA31 727 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 OR2A12Q8NGT7 310 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 PIH1D2Q8WWB5 315 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 ECHDC3Q96DC8 303 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 CHFRQ96EP1 664 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 ZNF641Q96N77 438 aaPredicted RBP9.5□□□□□ -0.89
NIP7-202ENST00000254941 SMC6Q96SB8 1091 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 MCMBPQ9BTE3 642 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 MAGEE1Q9HCI5 957 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 HACD3Q9P035 362 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 SLC8A2Q9UPR5 921 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 SPO11Q9Y5K1 396 aa9.5□□□□□ -0.89
NIP7-202ENST00000254941 TMEM120BA0PK00 339 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 C2orf81A6NN90 581 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 TTC34A8MYJ7 566 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 TRIM49D1C9J1S8 452 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 H3BQ06 376 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 AURKAO14965 403 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SLC7A4O43246 635 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 RECQLP46063 649 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 ZNF140P52738 457 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 SLC18A1P54219 525 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 EPHB1P54762 984 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 PDE1BQ01064 536 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 DNAJC3Q13217 504 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SMAD1Q15797 465 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 ITPRIPL2Q3MIP1 535 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 NEPROQ6NW34 567 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 TIFABQ6ZNK6 161 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SH2D5Q6ZV89 423 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 STRA8Q7Z7C7 330 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 KDM1BQ8NB78 822 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 CALML6Q8TD86 181 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 HDAC10Q969S8 669 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 RBBP8Q99708 897 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 SSU72Q9NP77 194 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 IARS2Q9NSE4 1012 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 NLE1Q9NVX2 485 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 PLA2G4CQ9UP65 541 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 KCTD3Q9Y597 815 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 CKAP5Q14008 2032 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 A0A0J9YYE9 177 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 A6NNZ2 444 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 PRPF4O43172 522 aaKnown RBP eCLIP9.49□□□□□ -0.892e-8■■■■■ 28.6
NIP7-202ENST00000254941 TYROBPO43914 113 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 BNIP3LO60238 219 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 TRBC1P01850 177 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 MT-ND3P03897 115 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 ITGA2BP08514 1039 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 LPOP22079 712 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 MDH1P40925 334 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 ARSDP51689 593 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 LIMK2P53671 638 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 CSE1LP55060 971 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 PRAMEP78395 509 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 KDSRQ06136 332 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 THOC5Q13769 683 aaKnown RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 TUBB8Q3ZCM7 444 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 PREPLQ4J6C6 727 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 MROH9Q5TGP6 573 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 KIAA0408Q6ZU52 694 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 C4orf33Q8N1A6 199 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 CHST14Q8NCH0 376 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 C2CD4AQ8NCU7 369 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 OR13C4Q8NGS5 318 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 GABPB2Q8TAK5 448 aaPredicted RBP9.49□□□□□ -0.89
NIP7-202ENST00000254941 PTPRN2Q92932 1015 aa9.49□□□□□ -0.89
NIP7-202ENST00000254941 ALKBH8Q96BT7 664 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms