RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TACR2P21452 398 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 CORO1AP31146 461 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 RPL38P63173 70 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 PLD5Q8N7P1 536 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 DQX1Q8TE96 717 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 NTPCRQ9BSD7 190 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 HBS1LQ9Y450 684 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 MSI1O43347 362 aaKnown RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 DNTTP04053 509 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 ITGA1P56199 1179 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 ATAD1Q8NBU5 361 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 OR52K2Q8NGK3 314 aa19.03■□□□□ 0.64
PTPRE-201ENST00000254667 RERGQ96A58 199 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-201ENST00000254667 PPIBP23284 216 aaKnown RBP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 L1CAMP32004 1257 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 PLPP4Q5VZY2 271 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 FAM151BQ6UXP7 276 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 EFCAB3Q8N7B9 438 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 TEKT5Q96M29 485 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 ZNF184Q99676 751 aaPredicted RBP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 ZFYVE1Q9HBF4 777 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 SLIT2O94813 1529 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 NEDD8-MDP1E9PL57 170 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 FFAR3O14843 346 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 GPR42O15529 346 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 OR6A2O95222 327 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 CCNDBP1O95273 360 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 NDST3O95803 873 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 BCL10O95999 233 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 MRPS22P82650 360 aaKnown RBP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 ANXA8L1Q5VT79 327 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 TTC23Q5W5X9 447 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 CERS6Q6ZMG9 384 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 GPR180Q86V85 440 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 CLP1Q92989 425 aaKnown RBP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 VPS4AQ9UN37 437 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 ATRNL1Q5VV63 1379 aa19.02■□□□□ 0.64
PTPRE-201ENST00000254667 PRMT5O14744 637 aaPredicted RBP19.02■□□□□ 0.64
PTPRE-201ENST00000254667 MON2Q7Z3U7 1717 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 NFATC1O95644 943 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 C1RP00736 705 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 CDKN2BP42772 138 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 MAPKAPK2P49137 400 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 ELP6Q0PNE2 266 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 ABRQ12979 859 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 POM121L1PQ3SYA9 428 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 FUT10Q6P4F1 479 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 CNSTQ6PJW8 725 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 ASZ1Q8WWH4 475 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 GBA3Q9H227 469 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 RHBGQ9H310 441 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 DEC1Q9P2X7 70 aa19.02■□□□□ 0.63
PTPRE-201ENST00000254667 RPL26L1Q9UNX3 145 aaKnown RBP19.02■□□□□ 0.63
PTPRE-201ENST00000254667 ENO2P09104 434 aaPredicted RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 MYBL2P10244 700 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 UMPSP11172 480 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 PPIGQ13427 754 aaKnown RBP eCLIP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 TRIM71Q2Q1W2 868 aaKnown RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 IRGCQ6NXR0 463 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 GATAD2AQ86YP4 633 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 ULK2Q8IYT8 1036 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 C19orf18Q8NEA5 215 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 SLC44A1Q8WWI5 657 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 MFSD11O43934 449 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 FEN1P39748 380 aaKnown RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 CLCNKBP51801 687 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 CDH4P55283 916 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 LSM12Q3MHD2 195 aaKnown RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 APTXQ7Z2E3 356 aaKnown RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 C8orf59Q8N0T1 100 aaPredicted RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 FBXO30Q8TB52 745 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 C19orf60Q96EN9 201 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 ADI1Q9BV57 179 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 CDH19Q9H159 772 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 AASDHPPTQ9NRN7 309 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 DMAC2Q9NW81 257 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 KCTD5Q9NXV2 234 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 C15orf41Q9Y2V0 281 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 TMED10P49755 219 aaKnown RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 CCR3P51677 355 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 RASAL3Q86YV0 1011 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 POMGNT2Q8NAT1 580 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 FAM84AQ96KN4 292 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 TLE6Q9H808 572 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 APODP05090 189 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 LILRA4P59901 499 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 COL9A3Q14050 684 aaPredicted RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 AP5B1Q2VPB7 878 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 MACC1Q6ZN28 852 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
PTPRE-201ENST00000254667 CD99L2Q8TCZ2 262 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 ASF1AQ9Y294 204 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 POLR1DQ9Y2S0 133 aa19.01■□□□□ 0.63
PTPRE-201ENST00000254667 FGBP02675 491 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CDC42P60953 191 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 TIMM50Q3ZCQ8 353 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 CERCAMQ5T4B2 595 aa19■□□□□ 0.63
PTPRE-201ENST00000254667 SPACA7Q96KW9 195 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms