RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PLK1P53350 603 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 PRKAA1Q13131 559 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 PARP15Q460N3 678 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 KIAA1841Q6NSI8 718 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 KIAA0408Q6ZU52 694 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 PIM3Q86V86 326 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 MYLK4Q86YV6 388 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 FBXO22Q8NEZ5 403 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 SCG3Q8WXD2 468 aaKnown RBP18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 SPATA17Q96L03 361 aa18.8■□□□□ 0.6
PDLIM4-201ENST00000253754 SLC38A8A6NNN8 435 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 LDB2O43679 373 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 CCDC166P0CW27 439 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 ARSAP15289 507 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 CDKN2DP55273 166 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 NSUN2Q08J23 767 aaKnown RBP eCLIP18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 C6orf163Q5TEZ5 329 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 HECTD2Q5U5R9 776 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 TRIM67Q6ZTA4 783 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 BLOC1S5Q8TDH9 187 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 MRPL57Q9BQC6 102 aaKnown RBP18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 MIA3Q5JRA6 1907 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 LOC285095A0A1B0GVY8 99 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 PRAMEF11O60813 436 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 EFEMP2O95967 443 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 ZDHHC11BP0C7U3 371 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 PRAMEP78395 509 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 TSNAXIP1Q2TAA8 658 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 NXNQ6DKJ4 435 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 OR7D4Q8NG98 312 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 TBATAQ96M53 351 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 CATSPER2Q96P56 530 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 RC3H2Q9HBD1 1191 aaKnown RBP18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 GPAMQ9HCL2 828 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 CDH22Q9UJ99 828 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 PACSIN3Q9UKS6 424 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 CRYL1Q9Y2S2 319 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 FIS1Q9Y3D6 152 aa18.79■□□□□ 0.6
PDLIM4-201ENST00000253754 EFCAB14O75071 495 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 ATP6V1C1P21283 382 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 PIK3R1P27986 724 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 OR1D2P34982 312 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 GCKP35557 465 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 PRKAA2P54646 552 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 ZNF235Q14590 738 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 TECRLQ5HYJ1 363 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 SH2D4BQ5SQS7 431 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 TMEM207Q6UWW9 146 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 HPS6Q86YV9 775 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 KBTBD2Q8IY47 623 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 MAB21L3Q8N8X9 362 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 KDM1BQ8NB78 822 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 CALML6Q8TD86 181 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 DNAJC1Q96KC8 554 aaKnown RBP18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 ZNF558Q96NG5 402 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 TTC1Q99614 292 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 POLR1EQ9GZS1 481 aaKnown RBP18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 TNFRSF12AQ9NP84 129 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 DONSONQ9NYP3 566 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 CHD7Q9P2D1 2997 aa18.78■□□□□ 0.6
PDLIM4-201ENST00000253754 ZBBXA8MT70 800 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 GJB5O95377 273 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 S1PR4O95977 384 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 ANPEPP15144 967 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 DNAJB1P25685 340 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 CLCN5P51795 746 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 RING1Q06587 406 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 TNK2Q07912 1038 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 TCHHL1Q5QJ38 904 aaPredicted RBP18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 TMCO4Q5TGY1 634 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 METTL21CQ5VZV1 264 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 SNX32Q86XE0 403 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 ACTRT2Q8TDY3 377 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 IFT43Q96FT9 208 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 TMEM169Q96HH4 297 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 NSMCE3Q96MG7 304 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 ANKRD27Q96NW4 1050 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 YME1L1Q96TA2 773 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 MFSD1Q9H3U5 465 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 CXorf56Q9H5V9 222 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PDFQ9HBH1 243 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 CDYLQ9Y232 598 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 F5H5T6 163 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PAPSS2O95340 614 aaPredicted RBP18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 SLC4A1P02730 911 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PRSS56P0CW18 603 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 ATP5F1P24539 256 aaPredicted RBP18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 RPS24P62847 133 aaKnown RBP18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 FAM83EQ2M2I3 478 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PGM2L1Q6PCE3 622 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 C16orf59Q7L2K0 433 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 RNF168Q8IYW5 571 aaPredicted RBP18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 HIPK4Q8NE63 616 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 OR13C4Q8NGS5 318 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PYDC1Q8WXC3 89 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 FAM136AQ96C01 138 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 PHF21BQ96EK2 531 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 EXOC2Q96KP1 924 aa18.77■□□□□ 0.6
PDLIM4-201ENST00000253754 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms