RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DSC2Q02487 901 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 RALGDSQ12967 914 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 BBS12Q6ZW61 710 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 UBL4BQ8N7F7 174 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 TP53I13Q8NBR0 393 aaPredicted RBP24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 ARRDC2Q8TBH0 407 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 LRRN4Q8WUT4 740 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 TFB1MQ8WVM0 346 aaKnown RBP24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 KCTD5Q9NXV2 234 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 PPIL1Q9Y3C6 166 aa24.47■■□□□ 1.51
SDF2L1-201ENST00000248958 GOLGA6L3A6NEY3 463 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 FZD6O60353 706 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 ITGAVP06756 1048 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 ELFN1P0C7U0 828 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 GRK6P43250 576 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 PEX5P50542 639 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 PFN3P60673 137 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 LRRC14Q15048 493 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 LIPIQ6XZB0 460 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 USP45Q70EL2 814 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 RHBDD1Q8TEB9 315 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 SCRN2Q96FV2 425 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 CDC6Q99741 560 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 TRIM10Q9UDY6 481 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 PCOLCE2Q9UKZ9 415 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 PCNX2A6NKB5 2137 aa24.46■■□□□ 1.51
SDF2L1-201ENST00000248958 KNL1Q8NG31 2342 aa24.45■■□□□ 1.51
SDF2L1-201ENST00000248958 HACD1B0YJ81 288 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 APOC4-APOC2K7ER74 178 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 APOC2P02655 101 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 PRKCGP05129 697 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 ADRB1P08588 477 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 EPHA8P29322 1005 aaPredicted RBP24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 VIPR1P32241 457 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 RPL26P61254 145 aaKnown RBP24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 PTK2BQ14289 1009 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 PRKD1Q15139 912 aaPredicted RBP24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 SHBQ15464 509 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 PRAMEF14Q5SWL7 426 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 SAP25Q8TEE9 199 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 PIH1D2Q8WWB5 315 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 TDRD1Q9BXT4 1180 aaKnown RBP24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 OSBPL8Q9BZF1 889 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 B4GALT6Q9UBX8 382 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 DNPEPQ9ULA0 475 aa24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 RPL26L1Q9UNX3 145 aaKnown RBP24.45■■□□□ 1.5
SDF2L1-201ENST00000248958 SPTY2D1-AS1A0A0U1RR47 76 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 PSMD11O00231 422 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 CBFA2T3O75081 653 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 PECAM1P16284 738 aaPredicted RBP24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 IGFALSP35858 605 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 ADCY2Q08462 1091 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 NIPAL4Q0D2K0 466 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 ZBTB17Q13105 803 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 XRCC4Q13426 336 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 LLGL1Q15334 1064 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 TRIP6Q15654 476 aaKnown RBP24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 TEX44Q53QW1 395 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 CCDC181Q5TID7 509 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 GLRX5Q86SX6 157 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 SLC22A18ASQ8N1D0 253 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 CNTD1Q8N815 330 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 MCCC1Q96RQ3 725 aaPredicted RBP24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 VAT1Q99536 393 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 COQ6Q9Y2Z9 468 aa24.44■■□□□ 1.5
SDF2L1-201ENST00000248958 CABIN1Q9Y6J0 2220 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 MED19A0JLT2 244 aaPredicted RBP24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 GIPC1O14908 333 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 CCDC175P0C221 793 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 THOP1P52888 689 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 EPHB1P54762 984 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 IL9RQ01113 521 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 PDE1CQ14123 709 aaPredicted RBP24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 ARHGEF7Q14155 803 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 IRF4Q15306 451 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 SLC14A2Q15849 920 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 N4BP2L1Q5TBK1 243 aaPredicted RBP24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 ZNF662Q6ZS27 426 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 BAHD1Q8TBE0 780 aaPredicted RBP24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 CAMK1GQ96NX5 476 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 FERMT1Q9BQL6 677 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 HEMGNQ9BXL5 484 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 SEPT10Q9P0V9 454 aa24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 SAE1Q9UBE0 346 aaPredicted RBP24.43■■□□□ 1.5
SDF2L1-201ENST00000248958 COL5A1P20908 1838 aaPredicted RBP24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 A0A0U1RQJ8 604 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 RECQL5O94762 991 aaPredicted RBP24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 HEXIM1O94992 359 aaKnown RBP24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 TJP3O95049 919 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 PDHA1P08559 390 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 SEMG2Q02383 582 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 MTM1Q13496 603 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 WSCD2Q2TBF2 565 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 PARGQ86W56 976 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 AGAP3Q96P47 875 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 SLC25A51Q9H1U9 297 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 PCDH9Q9HC56 1237 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 MBNL1Q9NR56 388 aaKnown RBP24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 GUCA1BQ9UMX6 200 aa24.42■■□□□ 1.5
SDF2L1-201ENST00000248958 CHKBQ9Y259 395 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms