RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PCDHB9Q9Y5E1 797 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
VPREB3-201ENST00000248948 SPTY2D1-AS1A0A0U1RR47 76 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 GRID2IPA4D2P6 1211 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 H3BM21 787 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 KCNK1O00180 336 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 MTSS1O43312 755 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 CYP2A6P11509 494 aaPredicted RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 KRT10P13645 584 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 NME1P15531 152 aaKnown RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 ITIH2P19823 946 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 VIPR1P32241 457 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PTPN7P35236 360 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 NAP1L1P55209 391 aaKnown RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 RPL26P61254 145 aaKnown RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 DYNLT1P63172 113 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 FAM193AP78312 1265 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 DSC2Q02487 901 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 ITKQ08881 620 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 ZBTB17Q13105 803 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 MTM1Q13496 603 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PTK2BQ14289 1009 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 LRRC14Q15048 493 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 SLC14A2Q15849 920 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 MACC1Q6ZN28 852 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 CCDC50Q8IVM0 306 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 SYCE1Q8N0S2 351 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 NDUFAF2Q8N183 169 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 KIAA1524Q8TCG1 905 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PDCD6IPQ8WUM4 868 aaKnown RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 KRT35Q92764 455 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 TBATAQ96M53 351 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 KCTD5Q9NXV2 234 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 RPL26L1Q9UNX3 145 aaKnown RBP12.83□□□□□ -0.36
VPREB3-201ENST00000248948 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 EFR3BQ9Y2G0 817 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PPIL1Q9Y3C6 166 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 PCDHA3Q9Y5H8 950 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 RAI2Q9Y5P3 530 aa12.83□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF106Q9H2Y7 1883 aaKnown RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 TTC24A2A3L6 582 aaPredicted RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 CAPN8A6NHC0 703 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 MIF4GDA9UHW6 222 aaKnown RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 ARHGAP6O43182 974 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 TNFSF14O43557 240 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 LZTS3O60299 673 aaPredicted RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 CST8O60676 142 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 PIAS2O75928 621 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 APOC2P02655 101 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 CSF2P04141 144 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 PRKCGP05129 697 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 PEX5P50542 639 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 THOP1P52888 689 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 AP1B1Q10567 949 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 PDE1CQ14123 709 aaPredicted RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 FZD2Q14332 565 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 CNGA3Q16281 694 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 WSCD2Q2TBF2 565 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 NPNTQ6UXI9 565 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 LIPIQ6XZB0 460 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 GATAD2AQ86YP4 633 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 ARRDC2Q8TBH0 407 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 RHBDD1Q8TEB9 315 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 P3H4Q92791 437 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 SCRN2Q96FV2 425 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 ANGPTL2Q9UKU9 493 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
VPREB3-201ENST00000248948 COQ6Q9Y2Z9 468 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 DUSP10Q9Y6W6 482 aa12.82□□□□□ -0.36
VPREB3-201ENST00000248948 CHD8Q9HCK8 2581 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 A0A0J9YYE9 177 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 NPIPB15A6NHN6 443 aaPredicted RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 RECQL5O94762 991 aaPredicted RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 DKK1O94907 266 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 TRBC1P01850 177 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 FTH1P19P0C7X4 201 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 PECAM1P16284 738 aaPredicted RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF30P17039 623 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 LHCGRP22888 699 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 RWDD2BP57060 319 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 KIAA1024LP59773 190 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 PRAMEF14Q5SWL7 426 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 KAZNQ674X7 775 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 ESRP1Q6NXG1 681 aaKnown RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 RAVER1Q8IY67 606 aaKnown RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 CNTD1Q8N815 330 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms