RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 MAFKO60675 156 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 CKMT1AP12532 417 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 KDELR1P24390 212 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 ITPKBP27987 946 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 ILKQ13418 452 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 RTP5Q14D33 572 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 TMEM52BQ4KMG9 183 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 ANKRD20A8PQ5CZ79 823 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 RALGPS1Q5JS13 557 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 CPNE8Q86YQ8 564 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 CAMK1DQ8IU85 385 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 TSEN2Q8NCE0 465 aaKnown RBP16.27■□□□□ 0.2
CLPP-201ENST00000245816 SPOCK2Q92563 424 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 WRAP53Q9BUR4 548 aaKnown RBP16.27■□□□□ 0.2
CLPP-201ENST00000245816 CINPQ9BW66 212 aaPredicted RBP16.27■□□□□ 0.2
CLPP-201ENST00000245816 CLPBQ9H078 707 aa16.27■□□□□ 0.2
CLPP-201ENST00000245816 DDX56Q9NY93 547 aaKnown RBP16.27■□□□□ 0.2
CLPP-201ENST00000245816 A0A1W2PQ67 120 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 PEX11BO96011 259 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 MT-CO3P00414 261 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 CD48P09326 243 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 MX2P20592 715 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 RABIFP47224 123 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 C1orf61Q13536 156 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 LBRQ14739 615 aaKnown RBP16.26■□□□□ 0.19
CLPP-201ENST00000245816 WSCD2Q2TBF2 565 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 ATP13A4Q4VNC1 1196 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
CLPP-201ENST00000245816 TIGD7Q6NT04 549 aaPredicted RBP16.26■□□□□ 0.19
CLPP-201ENST00000245816 BRAT1Q6PJG6 821 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 RAD9BQ6WBX8 426 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 PDZD3Q86UT5 571 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 CACTIN-AS1Q8N1I8 211 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 PELI3Q8N2H9 469 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 TXLNBQ8N3L3 684 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 FAM181AQ8N9Y4 354 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 PCDH19Q8TAB3 1148 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 TSGA13Q96PP4 275 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 RNF157Q96PX1 679 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 PCDH12Q9NPG4 1184 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 HAUS2Q9NVX0 235 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 NLGN3Q9NZ94 848 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
CLPP-201ENST00000245816 FPGTO14772 594 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 OPA1O60313 960 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
CLPP-201ENST00000245816 CCNCP24863 283 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
CLPP-201ENST00000245816 AP1S1P61966 158 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 GALNT2Q10471 571 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 RALGDSQ12967 914 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 MMRN1Q13201 1228 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 SGCGQ13326 291 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 IRF4Q15306 451 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 DEFB133Q30KQ1 61 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 SRLQ86TD4 932 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 PARGQ86W56 976 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 DCP2Q8IU60 420 aaKnown RBP16.25■□□□□ 0.19
CLPP-201ENST00000245816 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 TEX26Q8N6G2 289 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 PLA2G15Q8NCC3 412 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 DENND6BQ8NEG7 585 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 ATP13A3Q9H7F0 1226 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 RP1P56715 2156 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
CLPP-201ENST00000245816 LRP4O75096 1905 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.24■□□□□ 0.19
CLPP-201ENST00000245816 PMS2P1A4D2B8 440 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 NEMP1O14524 444 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
CLPP-201ENST00000245816 AQP9O43315 295 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 PSTPIP1O43586 416 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 JUNDP17535 347 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 TGM2P21980 687 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 CES1P23141 567 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 SERPINA4P29622 427 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 GARSP41250 739 aaKnown RBP16.24■□□□□ 0.19
CLPP-201ENST00000245816 POLR2LP62875 67 aaKnown RBP16.24■□□□□ 0.19
CLPP-201ENST00000245816 ELP6Q0PNE2 266 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 IHHQ14623 411 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 PTPRRQ15256 657 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 IFI16Q16666 785 aaKnown RBP16.24■□□□□ 0.19
CLPP-201ENST00000245816 UGP2Q16851 508 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 PERM1Q5SV97 790 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 ZFYVE27Q5T4F4 411 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 MARC1Q5VT66 337 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 C11orf63Q6NUN7 778 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 GUSBP11Q6P575 273 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 PGBD5Q8N414 524 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 RAPGEF5Q92565 580 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 ECHDC3Q96DC8 303 aa16.24■□□□□ 0.19
CLPP-201ENST00000245816 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms