RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KLC3Q6P597 504 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 HTR3DQ70Z44 454 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 SDCCAG8Q86SQ7 713 aaPredicted RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 CPXM2Q8N436 756 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 DCAF4L2Q8NA75 395 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 NLE1Q9NVX2 485 aaPredicted RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 APOBEC2Q9Y235 224 aaKnown RBP23.36■■□□□ 1.33
MSX2-201ENST00000239243 VWA7Q9Y334 891 aa23.36■■□□□ 1.33
MSX2-201ENST00000239243 TRAV19A0A0A6YYK7 116 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 C2orf81A6NN90 581 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 MYL4P12829 197 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 ZNF789Q5FWF6 425 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 FSCBQ5H9T9 825 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 GLT6D1Q7Z4J2 308 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 MAB21L3Q8N8X9 362 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 KREMEN2Q8NCW0 462 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 NDNQ99608 321 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 GATA5Q9BWX5 397 aaPredicted RBP23.35■■□□□ 1.33
MSX2-201ENST00000239243 LRRC3Q9BY71 257 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 CATSPERZQ9NTU4 200 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 RAI2Q9Y5P3 530 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 SBK3P0C264 359 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 MZF1P28698 734 aaPredicted RBP23.35■■□□□ 1.33
MSX2-201ENST00000239243 ZXDBP98169 803 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 SNCBQ16143 134 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 MPP7Q5T2T1 576 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 NAPRTQ6XQN6 538 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 OR4L1Q8NH43 312 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 PTCD3Q96EY7 689 aaKnown RBP23.35■■□□□ 1.33
MSX2-201ENST00000239243 OLFM1Q99784 485 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 DRC3Q9H069 523 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 GPAMQ9HCL2 828 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 OR51B4Q9Y5P0 310 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 IRAK3Q9Y616 596 aa23.35■■□□□ 1.33
MSX2-201ENST00000239243 DENND4CQ5VZ89 1909 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 CCDC162PA2VCL2 907 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 SNAP91O60641 907 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 SNUPNO95149 360 aaKnown RBP23.34■■□□□ 1.33
MSX2-201ENST00000239243 CD160O95971 181 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 MFN1Q8IWA4 741 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 OR13C4Q8NGS5 318 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 C2orf49Q9BVC5 232 aaPredicted RBP23.34■■□□□ 1.33
MSX2-201ENST00000239243 ILKAPQ9H0C8 392 aaPredicted RBP23.34■■□□□ 1.33
MSX2-201ENST00000239243 ARL8BQ9NVJ2 186 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 PNPOQ9NVS9 261 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 MARCH4Q9P2E8 410 aaPredicted RBP23.34■■□□□ 1.33
MSX2-201ENST00000239243 PRKAG2Q9UGJ0 569 aa23.34■■□□□ 1.33
MSX2-201ENST00000239243 CCL22O00626 93 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 LTA4HP09960 611 aaKnown RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 PIRTP0C851 137 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 ESRRAP11474 423 aaPredicted RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 ARRB2P32121 409 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 CSKP41240 450 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 ZNF140P52738 457 aaPredicted RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 MPPE1Q53F39 396 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 HS6ST3Q8IZP7 471 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 HEXDCQ8WVB3 486 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 USP13Q92995 863 aaPredicted RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 CCDC126Q96EE4 140 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 CDKN2AIPNLQ96HQ2 116 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 CDH19Q9H159 772 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 ASAH2Q9NR71 780 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 LZTS1Q9Y250 596 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 STK38LQ9Y2H1 464 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 OR51F1A6NGY5 319 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 PRLP01236 227 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 PSMA3P25788 255 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 GRIA4P48058 902 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 PGGT1BP53609 377 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 RHOAP61586 193 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 DLG1Q12959 904 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 CFAP157Q5JU67 520 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 RETSATQ6NUM9 610 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 NCEH1Q6PIU2 408 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 AFTPHQ6ULP2 937 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 LINGO4Q6UY18 593 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 TTC7BQ86TV6 843 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 TDRD5Q8NAT2 981 aaKnown RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 LPCAT1Q8NF37 534 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 DDI1Q8WTU0 396 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 NSMCE3Q96MG7 304 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 EBF4Q9BQW3 602 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 SUDS3Q9H7L9 328 aaPredicted RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 INTS10Q9NVR2 710 aaKnown RBP23.33■■□□□ 1.33
MSX2-201ENST00000239243 CFAP97Q9P2B7 532 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 LHX3Q9UBR4 397 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 VPS51Q9UID3 782 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 RAP2CQ9Y3L5 183 aa23.33■■□□□ 1.33
MSX2-201ENST00000239243 ANKRD66B4E2M5 251 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 SCAMP3O14828 347 aaKnown RBP23.32■■□□□ 1.32
MSX2-201ENST00000239243 GLUD1P00367 558 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 RBP1P09455 135 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 RCN2Q14257 317 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 CSHL1Q14406 222 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 RNF135Q8IUD6 432 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 PDCD6IPQ8WUM4 868 aaKnown RBP23.32■■□□□ 1.32
MSX2-201ENST00000239243 ACDQ96AP0 544 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 ALG14Q96F25 216 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 TCF25Q9BQ70 676 aa23.32■■□□□ 1.32
MSX2-201ENST00000239243 IGSF5Q9NSI5 407 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms