RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
VAMP4-201ENST00000236192 SH3D21A4FU49 640 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 MYL12BO14950 172 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 POLR1CO15160 346 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 SULT1C4O75897 302 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RPS3P23396 243 aaKnown RBP eCLIP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 AKT1P31749 480 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 STARP49675 285 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 DAG1Q14118 895 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CSHL1Q14406 222 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 OXA1LQ15070 435 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RAP1GAP2Q684P5 730 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 DSG4Q86SJ6 1040 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ANKRD53Q8N9V6 530 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RNFT2Q96EX2 444 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CBWD1Q9BRT8 395 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 TMEM161AQ9NX61 479 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 SSR3Q9UNL2 185 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 AGRPO00253 132 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CABYRO75952 493 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CSF1RP07333 972 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 LBPP18428 481 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 GSTM2P28161 218 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 MOXD1Q6UVY6 613 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF34Q8IZ26 560 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 SLC7A3Q8WY07 619 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 TRNT1Q96Q11 434 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 DSN1Q9H410 356 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 OLA1Q9NTK5 396 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PRAMEF33A0A0G2JMD5 474 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ACSL4O60488 711 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PRAMEF10O60809 474 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PGRP06401 933 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 WARSP23381 471 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 GK3PQ14409 553 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 DSC3Q14574 896 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CDK10Q15131 360 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PSMD5Q16401 504 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ANKRD22Q5VYY1 191 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 KCNMB4Q86W47 210 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 FEM1AQ9BSK4 669 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 C1QTNF1Q9BXJ1 281 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 UCK2Q9BZX2 261 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ITM2CQ9NQX7 267 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CFL2Q9Y281 166 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 MAB21L2Q9Y586 359 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 F8VP50 259 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 STX16-NPEPL1H3BU86 382 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RSL1D1O76021 490 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 GTF2E2P29084 291 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CYP4F2P78329 520 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 NPTX1Q15818 432 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 OR10T2Q8NGX3 314 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 SLC30A2Q9BRI3 323 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 TMEM168Q9H0V1 697 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 GPN2Q9H9Y4 310 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 PEX14O75381 377 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 MAZP56270 477 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 KIZQ2M2Z5 673 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 STXBP5Q5T5C0 1151 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 EPGNQ6UW88 154 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 RAVER1Q8IY67 606 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 ZNF597Q96LX8 424 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CPXM1Q96SM3 734 aa12.92□□□□□ -0.34
VAMP4-201ENST00000236192 EIF3KQ9UBQ5 218 aaKnown RBP12.92□□□□□ -0.34
VAMP4-201ENST00000236192 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SSX5O60225 188 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ERVK-10P10266 1014 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CHRNB2P17787 502 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 TFEBP19484 476 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 ESCO2Q56NI9 601 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 DENND6AQ8IWF6 608 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 COLGALT1Q8NBJ5 622 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 GTF2H4Q92759 462 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SIRPGQ9P1W8 387 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 POLG2Q9UHN1 485 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-201ENST00000236192 MYL9P24844 172 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 SDC2P34741 201 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 NUDT1P36639 197 aa12.91□□□□□ -0.34
VAMP4-201ENST00000236192 CSNK2BP67870 215 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms