RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 KIFC1Q9BW19 673 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 IFT22Q9H7X7 185 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ERVMER34-1Q9H9K5 563 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 GLTPQ9NZD2 209 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 COQ3Q9NZJ6 369 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 ZNF639Q9UID6 485 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 OSGIN1Q9UJX0 560 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 NUDT5Q9UKK9 219 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 CDYLQ9Y232 598 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 NAALAD2Q9Y3Q0 740 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 TBX3O15119 743 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 RBP1P09455 135 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 PSKH1P11801 424 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 RPL14P50914 215 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 LSM3P62310 102 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 C8orf82Q6P1X6 216 aaPredicted RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 MOXD1Q6UVY6 613 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 USP37Q86T82 979 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 KIAA1958Q8N8K9 716 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 EIF2AK1Q9BQI3 630 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 LPIN3Q9BQK8 851 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 TEX13BQ9BXU2 312 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
MSH2-201ENST00000233146 RAP2CQ9Y3L5 183 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 GRIP1Q9Y3R0 1128 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
MSH2-201ENST00000233146 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 HMX3A6NHT5 357 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 H3BMM5 538 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TOR1AO14656 332 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 CDK14O94921 469 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 CCNE2O96020 404 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 APOA1P02647 267 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TRAPPC2P0DI81 140 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TRAPPC2BP0DI82 140 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 IL7P13232 177 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 PIGFQ07326 219 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 INPP5AQ14642 412 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TAZQ16635 292 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 PLA2G4EQ3MJ16 856 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 PPM1JQ5JR12 505 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 GLRA4Q5JXX5 417 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 REP15Q6BDI9 236 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 THAP5Q7Z6K1 395 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 C7orf57Q8NEG2 295 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 MCFD2Q8NI22 146 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 MARC2Q969Z3 335 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 XPNPEP3Q9NQH7 507 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZNF358Q9NW07 568 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 G3V2L1 256 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 SSX4O60224 188 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 CPNE3O75131 537 aaKnown RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 CHRNGP07510 517 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 PCNAP12004 261 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 IL7RP16871 459 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 IL1R2P27930 398 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 GGT5P36269 586 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 GPR50Q13585 617 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 MFSD10Q14728 455 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 KCNT1Q5JUK3 1230 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TMEM151BQ8IW70 566 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 DNAJC10Q8IXB1 793 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 SMG8Q8ND04 991 aaKnown RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 OR4M1Q8NGD0 313 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 POMGNT1Q8WZA1 660 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 YIPF6Q96EC8 236 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZNF577Q9BSK1 485 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 FTHL17Q9BXU8 183 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ASPSCR1Q9BZE9 553 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.06□□□□□ -0.322e-11■■■■■ 37.1
MSH2-201ENST00000233146 ZNF556Q9HAH1 456 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 CAPN5O15484 640 aaPredicted RBP13.06□□□□□ -0.32
MSH2-201ENST00000233146 TGFB3P10600 412 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 TFEBP19484 476 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 UGT2B10P36537 528 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 OGDHQ02218 1023 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 PDK2Q15119 407 aa13.06□□□□□ -0.32
MSH2-201ENST00000233146 ZNF767PQ75MW2 155 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms