RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TLR9Q9NR96 1032 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 ZNF510Q9Y2H8 683 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 RNF11Q9Y3C5 154 aa20.68■□□□□ 0.9
SNX3-201ENST00000230085 DYTNA2CJ06 578 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 DCLK1O15075 740 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 TRIM24O15164 1050 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 DAB1O75553 588 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 VAPBO95292 243 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 PIGNO95427 931 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 GRIA4P48058 902 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 HCAR3P49019 387 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 ADARP55265 1226 aaKnown RBP20.67■□□□□ 0.9
SNX3-201ENST00000230085 DNAJB13P59910 316 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 SOWAHAQ2M3V2 549 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 GPR153Q6NV75 609 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 CNTN4Q8IWV2 1026 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 LSMEM2Q8N112 164 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 GOLM1Q8NBJ4 401 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 RNF139Q8WU17 664 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 LRRN4Q8WUT4 740 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 AGAP3Q96P47 875 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 ZBP1Q9H171 429 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 WDR55Q9H6Y2 383 aaPredicted RBP20.67■□□□□ 0.9
SNX3-201ENST00000230085 GDAP2Q9NXN4 497 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 APPL1Q9UKG1 709 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 TRHDEQ9UKU6 1024 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 COL4A4P53420 1690 aaPredicted RBP20.67■□□□□ 0.9
SNX3-201ENST00000230085 FGFR3P22607 806 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 PCSK6P29122 969 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 SLC7A1P30825 629 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 MAGEA8P43361 318 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 KIAA1841Q6NSI8 718 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 PDZD4Q76G19 769 aaPredicted RBP20.67■□□□□ 0.9
SNX3-201ENST00000230085 BBS5Q8N3I7 341 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 VAT1Q99536 393 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 TTPALQ9BTX7 342 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 HERC2P3Q9BVR0 1158 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 CDH7Q9ULB5 785 aa20.67■□□□□ 0.9
SNX3-201ENST00000230085 COPG1Q9Y678 874 aaKnown RBP20.67■□□□□ 0.9
SNX3-201ENST00000230085 CHRNGP07510 517 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 CTSAP10619 480 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 ATP6V1B1P15313 513 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 PAX3P23760 479 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 ZNF135P52742 658 aaPredicted RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 PPIDQ08752 370 aaKnown RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 STX5Q13190 355 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 FAM182AQ5T1J6 154 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 KIAA0319Q5VV43 1072 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 WSCD1Q658N2 575 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 C8orf82Q6P1X6 216 aaPredicted RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 KDM1BQ8NB78 822 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 CEP70Q8NHQ1 597 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 FNDC8Q8TC99 324 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 DNAJC1Q96KC8 554 aaKnown RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 MRPL45Q9BRJ2 306 aaKnown RBP20.66■□□□□ 0.9
SNX3-201ENST00000230085 B3GNT5Q9BYG0 378 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 ENTPD7Q9NQZ7 604 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 C8orf4Q9NR00 106 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 PCDHB8Q9UN66 801 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 MYRFQ9Y2G1 1151 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 MFHAS1Q9Y4C4 1052 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 AP4S1Q9Y587 144 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 NME7Q9Y5B8 376 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 PCDHGA7Q9Y5G6 932 aa20.66■□□□□ 0.9
SNX3-201ENST00000230085 ZNF638Q14966 1978 aaKnown RBP20.65■□□□□ 0.9
SNX3-201ENST00000230085 SYN3O14994 580 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 CXCL14O95715 111 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 EPHA3P29320 983 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 CA8P35219 290 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 NUP107P57740 925 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 IRF9Q00978 393 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 SCAPQ12770 1279 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 SFSWAPQ12872 951 aaKnown RBP20.65■□□□□ 0.9
SNX3-201ENST00000230085 SLC12A1Q13621 1099 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 PTK2BQ14289 1009 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 GK3PQ14409 553 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 PSMD5Q16401 504 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 PLPP4Q5VZY2 271 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 IYDQ6PHW0 289 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 PRSS55Q6UWB4 352 aaPredicted RBP20.65■□□□□ 0.9
SNX3-201ENST00000230085 DPH6Q7L8W6 267 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 PIWIL4Q7Z3Z4 852 aaKnown RBP20.65■□□□□ 0.9
SNX3-201ENST00000230085 ACOT1Q86TX2 421 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 KCNMB4Q86W47 210 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 ZC3HC1Q86WB0 502 aaKnown RBP20.65■□□□□ 0.9
SNX3-201ENST00000230085 DEFB123Q8N688 67 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 ANKFN1Q8N957 763 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 MFSD2AQ8NA29 543 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 NTAN1Q96AB6 310 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 TSNARE1Q96NA8 513 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 GBA3Q9H227 469 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 ZDHHC2Q9UIJ5 367 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 SLC8A2Q9UPR5 921 aa20.65■□□□□ 0.9
SNX3-201ENST00000230085 C7orf72A4D263 438 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 HIDE1A8MVS5 230 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 H3BSA7 217 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 HUS1O60921 280 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 PFDN1O60925 122 aa20.64■□□□□ 0.9
SNX3-201ENST00000230085 URODP06132 367 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms