RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 OCEL1Q9H607 264 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 CCDC167Q9P0B6 97 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 FNIP2Q9P278 1114 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 APPL1Q9UKG1 709 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 DNAH12Q6ZR08 3092 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 PAPSS2O95340 614 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 ZNF26P17031 533 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 CREB5Q02930 508 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 PAOXQ6QHF9 649 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 METTL25Q8N6Q8 603 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 PNPLA1Q8N8W4 532 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 RSPH1Q8WYR4 309 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 AGO3Q9H9G7 860 aaKnown RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 NT5MQ9NPB1 228 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 ATXN10Q9UBB4 475 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 SNRPB2P08579 225 aaKnown RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 FAM58BPP0C7Q3 252 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 RGS2P41220 211 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 CD86P42081 329 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 TSPY1Q01534 308 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 RHDQ02161 417 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 RALGDSQ12967 914 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 APOFQ13790 326 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 PIK3R6Q5UE93 754 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 CYHR1Q6ZMK1 362 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 DGCR14Q96DF8 476 aaKnown RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 SPAG4Q9NPE6 437 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 VPS45Q9NRW7 570 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 TRAF6Q9Y4K3 522 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 AP4S1Q9Y587 144 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 PRORSD1PA6NEY8 169 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 UBFD1O14562 309 aaKnown RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 SLC7A4O43246 635 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 IMPDH1P20839 514 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 MLLT6P55198 1093 aaPredicted RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 MAXP61244 160 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 MGAT3Q09327 533 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 TRAP1Q12931 704 aaKnown RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 EML3Q32P44 896 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 GDF6Q6KF10 455 aaPredicted RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 TMEM207Q6UWW9 146 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 PTAR1Q7Z6K3 402 aaPredicted RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 SPATA2LQ8IUW3 424 aaPredicted RBP16.34■□□□□ 0.21
LTBR-201ENST00000228918 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 UMODL1-AS1Q8N2C9 162 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 SERPINB11Q96P15 392 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 TRMOQ9BU70 441 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 SLC25A23Q9BV35 468 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 CD300AQ9UGN4 299 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 VWA7Q9Y334 891 aa16.34■□□□□ 0.21
LTBR-201ENST00000228918 A0A1W2PQH9 124 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 H0YJX3 145 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 MRASO14807 208 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 VILLO15195 856 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 MGEA5O60502 916 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 GPC4O75487 556 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ITGB1P05556 798 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 MMP2P08253 660 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 GRIK1P39086 918 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 RENBPP51606 427 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 CDKN2DP55273 166 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 IHHQ14623 411 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 FAM219BQ5XKK7 198 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 FAM45BPQ6NSW5 357 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 C8orf82Q6P1X6 216 aaPredicted RBP16.33■□□□□ 0.2
LTBR-201ENST00000228918 RBM44Q6ZP01 1051 aaKnown RBP16.33■□□□□ 0.2
LTBR-201ENST00000228918 FAM45AQ8TCE6 357 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 LPGAT1Q92604 370 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 FATE1Q969F0 183 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 EME1Q96AY2 570 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 NMD3Q96D46 503 aaKnown RBP16.33■□□□□ 0.2
LTBR-201ENST00000228918 L3HYPDHQ96EM0 354 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 C1orf74Q96LT6 269 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 RBM38Q9H0Z9 239 aaKnown RBP16.33■□□□□ 0.2
LTBR-201ENST00000228918 MFSD1Q9H3U5 465 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ALG9Q9H6U8 611 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 MYOCOSA0A1B0GUC4 107 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 TCRBV3S1A0A5B6 114 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 MROH6A6NGR9 719 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 J3KR12 359 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 GPR182O15218 404 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ZNF623O75123 536 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 YWHAQP27348 245 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 SLC26A3P40879 764 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ATP4BP51164 291 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ARSDP51689 593 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 NDST2P52849 883 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 SLC10A7Q0GE19 358 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 C6orf10Q5SRN2 563 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 ZNF678Q5SXM1 525 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 GPR158Q5T848 1215 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 CLEC6AQ6EIG7 209 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 IYDQ6PHW0 289 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.2
LTBR-201ENST00000228918 LARP4Q71RC2 724 aaKnown RBP eCLIP16.33■□□□□ 0.2
LTBR-201ENST00000228918 LDB1Q86U70 411 aaPredicted RBP16.33■□□□□ 0.2
LTBR-201ENST00000228918 TRIM74Q86UV6 250 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms