RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 LIN28AQ9H9Z2 209 aaKnown RBP11.8□□□□□ -0.52
TNFAIP1-201ENST00000226225 ATXN10Q9UBB4 475 aa11.8□□□□□ -0.52
TNFAIP1-201ENST00000226225 CCL26Q9Y258 94 aa11.8□□□□□ -0.52
TNFAIP1-201ENST00000226225 CHD7Q9P2D1 2997 aa11.8□□□□□ -0.52
TNFAIP1-201ENST00000226225 MATN3O15232 486 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 SNAP91O60641 907 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ANXA9O76027 345 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ZDHHC11BP0C7U3 371 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CHRNA4P43681 627 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 SGSHP51688 502 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 TRMT5Q32P41 509 aaKnown RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 NAPEPLDQ6IQ20 393 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 TDRPQ86YL5 185 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ARHGAP12Q8IWW6 846 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 OVCA2Q8WZ82 227 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 VAT1Q99536 393 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 BBS2Q9BXC9 721 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 DNMT3BQ9UBC3 853 aaKnown RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 AAR2Q9Y312 384 aaKnown RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 A0A1B0GVM2 712 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 TCAF2A6NFQ2 919 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 MAFKO60675 156 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 HLA-DQB2P05538 268 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 RB1P06400 928 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CCR2P41597 374 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ACTR3P61158 418 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 HSF5Q4G112 596 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 DHDDSQ86SQ9 333 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CNTD1Q8N815 330 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 BLOC1S5Q8TDH9 187 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 MOCOSQ96EN8 888 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 WWP1Q9H0M0 922 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 GLOD4Q9HC38 313 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 UBA2Q9UBT2 640 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 LEFTY2O00292 366 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ATP6V1G1O75348 118 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CLCN4P51793 760 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 KCNJ11Q14654 390 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 EFHBQ8N7U6 833 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 ICA1LQ8NDH6 482 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 OR6P1Q8NGX9 317 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CDKL2Q92772 493 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 TRMT2BQ96GJ1 504 aaKnown RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 NR1H4Q96RI1 486 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 CIPCQ9C0C6 399 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 TDP1Q9NUW8 608 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 DNAJC16Q9Y2G8 782 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
TNFAIP1-201ENST00000226225 PMLP29590 882 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 CDH4P55283 916 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 NET1Q7Z628 596 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 PTAR1Q7Z6K3 402 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 TMEM248Q9NWD8 314 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 SYBUQ9NX95 663 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 LILRB3O75022 631 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 CLASP2O75122 1294 aaKnown RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 MZF1P28698 734 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 ABCG1P45844 678 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 FOLH1Q04609 750 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 RNF111Q6ZNA4 994 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 SDCCAG8Q86SQ7 713 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 APLFQ8IW19 511 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 HJURPQ8NCD3 748 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 RAB3IL1Q8TBN0 382 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 C15orf38-AP3S2A0A0A6YYH1 394 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 ITM2AO43736 263 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 POLBP06746 335 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 NDST2P52849 883 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 GEMP55040 296 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 RHOAP61586 193 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 STX3Q13277 289 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 GSTA3Q16772 222 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 CMPK2Q5EBM0 449 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 FBXL19Q6PCT2 694 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 ARPINQ7Z6K5 226 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 TMEM150AQ86TG1 271 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 CAND1Q86VP6 1230 aaKnown RBP11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 GBA3Q9H227 469 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 LINC00597Q9H2U6 94 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
TNFAIP1-201ENST00000226225 GOLGA8QA0A0J9YX86 632 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 GOLGA8OA6NCC3 632 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 E9PBE3 544 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 GOLGA8NF8WBI6 632 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 NEMP1O14524 444 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 AIM2O14862 343 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 KLHL41O60662 606 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 WNT3AP56704 352 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 UBE3AQ05086 875 aa11.77□□□□□ -0.52
TNFAIP1-201ENST00000226225 SEMA5AQ13591 1074 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms