RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 FGD3Q5JSP0 725 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 TBCELQ5QJ74 424 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.42
NUP88-201ENST00000225696 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 NOTUMQ6P988 496 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 TTC33Q6PID6 262 aaPredicted RBP12.46□□□□□ -0.42
NUP88-201ENST00000225696 XKR5Q6UX68 686 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 Q6ZNX1 250 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ZNF554Q86TJ5 538 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 PIM3Q86V86 326 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 CMTR2Q8IYT2 770 aaKnown RBP12.46□□□□□ -0.42
NUP88-201ENST00000225696 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ZFP42Q96MM3 310 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 TCF12Q99081 682 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 SLC25A23Q9BV35 468 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ADI1Q9BV57 179 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.42
NUP88-201ENST00000225696 DSEQ9UL01 958 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 OAZ3Q9UMX2 235 aa12.46□□□□□ -0.42
NUP88-201ENST00000225696 ANKRD12Q6UB98 2062 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 A0A1B0GTL3 188 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 A0A1W2PPW3 197 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 MEIS3P2A8K0S8 358 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 NR5A2O00482 541 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 MTSS1O43312 755 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CAPN3P20807 821 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 ADRA1AP35348 466 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 GRB7Q14451 532 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 PCSK7Q16549 785 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 UGP2Q16851 508 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 ZBED5Q49AG3 693 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 GPR107Q5VW38 600 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 NEPROQ6NW34 567 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 SMYD1Q8NB12 490 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 PCED1BQ96HM7 432 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 VAT1Q99536 393 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 GPATCH1Q9BRR8 931 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 ALG9Q9H6U8 611 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 AKTIPQ9H8T0 292 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CCM2LQ9NUG4 571 aaPredicted RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CMTM6Q9NX76 183 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 ZNF711Q9Y462 761 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 TRIM64CA6NLI5 447 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 H3BMQ9 156 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 FXYD1O00168 92 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 ACOX3O15254 700 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 SUPT7LO94864 414 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CD4P01730 458 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 HLA-DQB2P05538 268 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 MTHFD1P11586 935 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 BDNFP23560 247 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 MAGEA10P43363 369 aaPredicted RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 SLC12A2P55011 1212 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CDKN2DP55273 166 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 NAA20P61599 178 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 SH3BP2P78314 561 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 MERTKQ12866 999 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 GPR158Q5T848 1215 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 TMEM26Q6ZUK4 368 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 LINC00523Q86TU6 105 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 TAC4Q86UU9 113 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 CYGBQ8WWM9 190 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 TANKQ92844 425 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 COG8Q96MW5 612 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 KCNA7Q96RP8 456 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 RPF2Q9H7B2 306 aaKnown RBP12.45□□□□□ -0.42
NUP88-201ENST00000225696 CXorf21Q9HAI6 301 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 GLOD4Q9HC38 313 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 AGPAT4Q9NRZ5 378 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
NUP88-201ENST00000225696 RALGAPA2Q2PPJ7 1873 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 A0A087X1B8 175 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 A0A0J9YYE9 177 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 DHRS12A0PJE2 317 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
NUP88-201ENST00000225696 B4GAT1O43505 415 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 MAFKO60675 156 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 SIX3O95343 332 aaPredicted RBP12.44□□□□□ -0.42
NUP88-201ENST00000225696 CES1P23141 567 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 MYF6P23409 242 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 POLR2IP36954 125 aaKnown RBP12.44□□□□□ -0.42
NUP88-201ENST00000225696 CXCR3P49682 368 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 CCNA1P78396 465 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 POU4F1Q01851 419 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 IHHQ14623 411 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 MAPRE2Q15555 327 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 SLC36A3Q495N2 470 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 FBXO48Q5FWF7 155 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 UBXN11Q5T124 520 aa12.44□□□□□ -0.42
NUP88-201ENST00000225696 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms