RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 RTP2Q5QGT7 225 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 UGT2A3Q6UWM9 527 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 RSPO2Q6UXX9 243 aaPredicted RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 ANKS3Q6ZW76 656 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PGAM4Q8N0Y7 254 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 ZBTB26Q9HCK0 441 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 MARCH2Q9P0N8 246 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 XPR1Q9UBH6 696 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 HCSTQ9UBK5 93 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 SLC27A5Q9Y2P5 690 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 DTNAQ9Y4J8 743 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 DENRO43583 198 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 SOAT2O75908 522 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 GALTP07902 379 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PABPC4LP0CB38 370 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 GSTT1P30711 240 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PGGT1BP53609 377 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 ITKQ08881 620 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 GRAMD1BQ3KR37 738 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 MGAT5BQ3V5L5 792 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 TSTD2Q5T7W7 516 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 ZFP1Q6P2D0 407 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 RNF19BQ6ZMZ0 732 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 KDELC2Q7Z4H8 507 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 CEP97Q8IW35 865 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 TEX26Q8N6G2 289 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 RCN3Q96D15 328 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PABPC5Q96DU9 382 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 PPP1R36Q96LQ0 422 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 MRPL57Q9BQC6 102 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 MRPL46Q9H2W6 279 aaKnown RBP22.32■■□□□ 1.16
CCDC9-201ENST00000221922 CRISPLD1Q9H336 500 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 BCAP29Q9UHQ4 241 aa22.32■■□□□ 1.16
CCDC9-201ENST00000221922 TET1Q8NFU7 2136 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 J3KR12 359 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 CD86P42081 329 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 CHN2P52757 468 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 RING1Q06587 406 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 RFTN1Q14699 578 aaPredicted RBP22.31■■□□□ 1.16
CCDC9-201ENST00000221922 ALFQ53S48 1182 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 RASIP1Q5U651 963 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 FBXL19Q6PCT2 694 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 MFSD6LQ8IWD5 586 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 KDM1BQ8NB78 822 aa22.31■■□□□ 1.16
CCDC9-201ENST00000221922 ZNF296Q8WUU4 475 aaPredicted RBP22.31■■□□□ 1.16
CCDC9-201ENST00000221922 SEPT5Q99719 369 aaPredicted RBP22.31■■□□□ 1.16
CCDC9-201ENST00000221922 NPHS1O60500 1241 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 CNTN5O94779 1100 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TBX18O95935 607 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 JUNP05412 331 aaKnown RBP22.3■■□□□ 1.16
CCDC9-201ENST00000221922 CLCN5P51795 746 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TAS2R39P59534 338 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 SLC10A7Q0GE19 358 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 PARP15Q460N3 678 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 C10orf120Q5SQS8 335 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 FBXL22Q6P050 247 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 GALNT7Q86SF2 657 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 ZNF354CQ86Y25 554 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 MARVELD2Q8N4S9 558 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 NXNL1Q96CM4 212 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 CATSPER2Q96P56 530 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 PACSIN3Q9UKS6 424 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 SLC4A7Q9Y6M7 1214 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-201ENST00000221922 CAPN8A6NHC0 703 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 DRGXA6NNA5 263 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 ZDHHC11BP0C7U3 371 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 XRCC1P18887 633 aaPredicted RBP22.3■■□□□ 1.16
CCDC9-201ENST00000221922 IL10RBQ08334 325 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 CEACAM7Q14002 265 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 FLOT2Q14254 428 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TMEM198Q66K66 360 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 RAP1GAP2Q684P5 730 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TSPAN17Q96FV3 270 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 DCUN1D1Q96GG9 259 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 MAELQ96JY0 434 aaKnown RBP22.3■■□□□ 1.16
CCDC9-201ENST00000221922 EFCAB1Q9HAE3 211 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 G3BP2Q9UN86 482 aaKnown RBP22.3■■□□□ 1.16
CCDC9-201ENST00000221922 BRCA2P51587 3418 aa22.3■■□□□ 1.16
CCDC9-201ENST00000221922 TBKBP1A7MCY6 615 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 RAMP2O60895 175 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 GRIA2P42262 883 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 LEPRP48357 1165 aaKnown RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 ZNF460Q14592 562 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 RBBP5Q15291 538 aaKnown RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 MIB1Q86YT6 1006 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 PSMG2Q969U7 264 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 KLHL5Q96PQ7 755 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 WDR41Q9HAD4 459 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 CLGNO14967 610 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 MMP2P08253 660 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 KPNA1P52294 538 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 YBEYP58557 167 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 MAXP61244 160 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 ILF2Q12905 390 aaKnown RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 ADGRE1Q14246 886 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 POLD3Q15054 466 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-201ENST00000221922 TLR1Q15399 786 aa22.29■■□□□ 1.16
CCDC9-201ENST00000221922 TMEM173Q86WV6 379 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms