RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TRIM4Q9C037 500 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 ZYG11BQ9C0D3 744 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 TSR3Q9UJK0 312 aaKnown RBP14.69□□□□□ -0.06
CNOT3-201ENST00000221232 TRAF6Q9Y4K3 522 aa14.69□□□□□ -0.06
CNOT3-201ENST00000221232 PSMD12O00232 456 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF623O75123 536 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 RNASEH2AO75792 299 aaKnown RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 CCND3P30281 292 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 OR1E1P30953 314 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 PRKAA2P54646 552 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 FKBP1BP68106 108 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 PDCD6IPQ8WUM4 868 aaKnown RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 PTERQ96BW5 349 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 LRCH3Q96II8 777 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 RGS18Q9NS28 235 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 NT5C1B-RDH14C9J2C7 533 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 MUSKO15146 869 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 NPHS1O60500 1241 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF189O75820 626 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 HOXC13P31276 330 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 FLT3LGP49771 235 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 ZNF33AQ06730 810 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 POLD3Q15054 466 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 CNPY1Q3B7I2 92 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 LIN52Q52LA3 116 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 OGFRL1Q5TC84 451 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 MON1AQ86VX9 555 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 GIPC2Q8TF65 315 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 NSUN5Q96P11 429 aaKnown RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 KCNA7Q96RP8 456 aa14.68□□□□□ -0.06
CNOT3-201ENST00000221232 SEPT5Q99719 369 aaPredicted RBP14.68□□□□□ -0.06
CNOT3-201ENST00000221232 C15orf38-AP3S2A0A0A6YYH1 394 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 UNCXA6NJT0 531 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FBP2O00757 339 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 SCAMP3O14828 347 aaKnown RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 TADA2AO75478 443 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 CRTAMO95727 393 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 S1PR4O95977 384 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FESP07332 822 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ELNP15502 786 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PFKFB4Q16877 469 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ARPINQ7Z6K5 226 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 AMIGO2Q86SJ2 522 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 SPON2Q9BUD6 331 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ZDHHC7Q9NXF8 308 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FAM50BQ9Y247 325 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 CCDC160A6NGH7 325 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 NCF1BA6NI72 391 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 NCF1CA8MVU1 366 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 GOT2P00505 430 aaKnown RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 NCF1P14598 390 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 LEPRP48357 1165 aaKnown RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 CHN2P52757 468 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 IRX1P78414 480 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 CDKL1Q00532 357 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ECT2LQ008S8 904 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PFKPQ01813 784 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 TAF10Q12962 218 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 SEMA3AQ14563 771 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PTPRRQ15256 657 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 KIF19Q2TAC6 998 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 MGAT5BQ3V5L5 792 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 MAP3K21Q5TCX8 1036 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ISCA2Q86U28 154 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 RASAL3Q86YV0 1011 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FAM110BQ8TC76 370 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 NAT14Q8WUY8 206 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FBXO32Q969P5 355 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 NMD3Q96D46 503 aaKnown RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 TRIM62Q9BVG3 475 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 TLR6Q9Y2C9 796 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PCDHGA7Q9Y5G6 932 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 A0A0D9SEW6 157 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 UBXN8O00124 270 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 FOXA1P55317 472 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ADGRE1Q14246 886 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 DSC3Q14574 896 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 AFMIDQ63HM1 303 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 REP15Q6BDI9 236 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 GLB1LQ6UWU2 654 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 LRTOMTQ8WZ04 291 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 ESAMQ96AP7 390 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 C6orf203Q9P0P8 240 aaPredicted RBP14.67□□□□□ -0.06
CNOT3-201ENST00000221232 BTRCQ9Y297 605 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 AP4B1Q9Y6B7 739 aa14.67□□□□□ -0.06
CNOT3-201ENST00000221232 PRORSD1PA6NEY8 169 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 AHCYL1O43865 530 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 RAMP2O60895 175 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 KCNQ1P51787 676 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 CTXN3Q4LDR2 81 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 FAM171A1Q5VUB5 890 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 ARMC3Q5W041 872 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 SCIMPQ6UWF3 145 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 UGT2A3Q6UWM9 527 aa14.66□□□□□ -0.06
CNOT3-201ENST00000221232 SETD3Q86TU7 594 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms