RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PTPN7P35236 360 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SEC13P55735 322 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 USP46P62068 366 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 CERCAMQ5T4B2 595 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 UNC5AQ6ZN44 842 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TRAPPC5Q8IUR0 188 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 ZNF567Q8N184 647 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 CELF5Q8N6W0 485 aaKnown RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 ZNF366Q8N895 744 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 OSBPL2Q9H1P3 480 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 PARVBQ9HBI1 364 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM59LQ9UK28 342 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 RAI2Q9Y5P3 530 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3DA0A087WVF3 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3IA0A087WXS9 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3EA0A087X179 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3KA0A087X1G2 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 C2orf78A6NCI8 922 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TRIM43BA6NCK2 446 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3FA6NER0 549 aaPredicted RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3LB9A6J9 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 MATN3O15232 486 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 DNTTP04053 509 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3HP0C7X1 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 NUDT2P50583 147 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 ATXN3P54252 364 aaPredicted RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 DRG2P55039 364 aaKnown RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SPANXN3Q5MJ09 141 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SCARA3Q6AZY7 606 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3GQ6DHY5 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3CQ6IPX1 549 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 PATL1Q86TB9 770 aaKnown RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM173Q86WV6 379 aaPredicted RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TBC1D3Q8IZP1 549 aaPredicted RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 INPP5DQ92835 1189 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 TRIM43Q96BQ3 446 aaPredicted RBP9.46□□□□□ -0.9
CCDC113-201ENST00000219299 OSBPL7Q9BZF2 842 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SYTL2Q9HCH5 934 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 COMMD8Q9NX08 183 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 SLC24A2Q9UI40 661 aa9.46□□□□□ -0.9
CCDC113-201ENST00000219299 USP1O94782 785 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 FAM58BPP0C7Q3 252 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 CSKP41240 450 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 NDST2P52849 883 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 PPIDQ08752 370 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SGO1Q5FBB7 561 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 PDE12Q6L8Q7 609 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 HDAC10Q969S8 669 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SHCBP1LQ9BZQ2 653 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 WWOXQ9NZC7 414 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 PCDHGB4Q9UN71 923 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SCN4AP35499 1836 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 BCLAF3A2AJT9 711 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 KIAA0355O15063 1070 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SNAP91O60641 907 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 CNTN5O94779 1100 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 PABPC1P11940 636 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 LPOP22079 712 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ADRA1DP25100 572 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 FMO4P31512 558 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 GABRB2P47870 512 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 CDK7P50613 346 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ROR2Q01974 943 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 DSC1Q08554 894 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ATXN7L2Q5T6C5 722 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 TMPRSS6Q8IU80 811 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MYO1HQ8N1T3 1032 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 TMEM159Q96B96 161 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MIR1-1HGQ9H1L0 117 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 H3BQ06 376 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 LEFTY2O00292 366 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 FGF1P05230 155 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MYBL2P10244 700 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 MYOGP15173 224 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 FOXD4Q12950 439 aaPredicted RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 GRM2Q14416 872 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 RASA2Q15283 850 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 DLG2Q15700 870 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SPDYCQ5MJ68 293 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 DEPDC1Q5TB30 811 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 LRRC74BQ6ZQY2 392 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 STX19Q8N4C7 294 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 QKIQ96PU8 341 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 BTBD10Q9BSF8 475 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 HERC2P3Q9BVR0 1158 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 TAS2R13Q9NYV9 303 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 STMN3Q9NZ72 180 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 RNF112Q9ULX5 631 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 TRPC5OSA6NMA1 111 aa9.45□□□□□ -0.9
CCDC113-201ENST00000219299 RNASEH2AO75792 299 aaKnown RBP9.45□□□□□ -0.9
CCDC113-201ENST00000219299 RASSF9O75901 435 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms