RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PGM1P36871 562 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 PRAMEP78395 509 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 CCDC6Q16204 474 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 KHDC1Q4VXA5 237 aaKnown RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 MANEALQ5VSG8 457 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 TMEM198Q66K66 360 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 PEX5LQ8IYB4 626 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 PHTF2Q8N3S3 785 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 FSTL5Q8N475 847 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 TMEM199Q8N511 208 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 EFHBQ8N7U6 833 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 ATP6V0D2Q8N8Y2 350 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 RBM15BQ8NDT2 890 aaKnown RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 OR13C4Q8NGS5 318 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 TBATAQ96M53 351 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 FCRL5Q96RD9 977 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 MARCH4Q9P2E8 410 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
USP11-201ENST00000218348 APOBEC2Q9Y235 224 aaKnown RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 ZFP37Q9Y6Q3 630 aaPredicted RBP10.03□□□□□ -0.8
USP11-201ENST00000218348 C2orf78A6NCI8 922 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 SLC38A8A6NNN8 435 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 PDE5AO76074 875 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 JUNP05412 331 aaKnown RBP10.02□□□□□ -0.8
USP11-201ENST00000218348 CNTFP26441 200 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 SERPINB5P36952 375 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 ABCE1P61221 599 aaKnown RBP10.02□□□□□ -0.8
USP11-201ENST00000218348 SEMG2Q02383 582 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 SLC9B1Q4ZJI4 515 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 LINC00523Q86TU6 105 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 NPAS4Q8IUM7 802 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 TEX9Q8N6V9 391 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 RMDN1Q96DB5 314 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 IFT43Q96FT9 208 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 SORT1Q99523 831 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 TCAF1Q9Y4C2 921 aa10.02□□□□□ -0.8
USP11-201ENST00000218348 GPR39O43194 453 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 KRT36O76013 467 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SEC24AO95486 1093 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 GJA1P17302 382 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 HDCP19113 662 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 GRIA4P48058 902 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 RASSF2P50749 326 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 RENBPP51606 427 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DLG1Q12959 904 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DYNC1I2Q13409 638 aaKnown RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 EIF4EBP2Q13542 120 aaPredicted RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 RALGPS1Q5JS13 557 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 PDPK2PQ6A1A2 396 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 TIFABQ6ZNK6 161 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SLC39A13Q96H72 371 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 BTN2A3PQ96KV6 586 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 C7orf26Q96N11 449 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 OR52B2Q96RD2 323 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 BTBD10Q9BSF8 475 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 TRIM62Q9BVG3 475 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 FAM96AQ9H5X1 160 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 PCDHGC4Q9Y5F7 938 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 UBA6A0AVT1 1052 aaPredicted RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 ERI2A8K979 691 aaKnown RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 GSC2O15499 205 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 CCDC22O60826 627 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SNNO75324 88 aaPredicted RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 PIGNO95427 931 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SLC35E2BP0CK96 405 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 RAG1P15918 1043 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 RGRP47804 291 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SERPINH1P50454 418 aaKnown RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.813e-6■■■□□ 14.8
USP11-201ENST00000218348 ANO4Q32M45 955 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SIRPB2Q5JXA9 342 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 SMYD5Q6GMV2 418 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DPF3Q92784 378 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DNAJC1Q96KC8 554 aaKnown RBP10.02□□□□□ -0.81
USP11-201ENST00000218348 KIFC1Q9BW19 673 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 VN1R3Q9BXE9 311 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 KCNK4Q9NYG8 393 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 GTSE1Q9NYZ3 720 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DLGAP2Q9P1A6 1054 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 ACOT9Q9Y305 439 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 PLXNA3P51805 1871 aa10.02□□□□□ -0.81
USP11-201ENST00000218348 DOCK6Q96HP0 2047 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 F5H5T6 163 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 G3V2L1 256 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 STMN1P16949 149 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 RHOQP17081 205 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 TACR2P21452 398 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 IDH3AP50213 366 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 GPR17Q13304 367 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 ARL13AQ5H913 290 aaPredicted RBP10.01□□□□□ -0.81
USP11-201ENST00000218348 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
USP11-201ENST00000218348 ARTNQ5T4W7 220 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms