RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MIPEPQ99797 713 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 SEMA3CQ99985 751 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 UXTQ9UBK9 157 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 HEY2Q9UBP5 337 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 SOX13Q9UN79 622 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 MTO1Q9Y2Z2 717 aaKnown RBP8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 PLLPQ9Y342 182 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 HBS1LQ9Y450 684 aaKnown RBP8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 VWA8A3KMH1 1905 aa8.97□□□□□ -0.97
MTHFD1-201ENST00000216605 A0A0D9SEW6 157 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 FAM237BA0A1B0GVD1 139 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 H0Y626 953 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 KRT36O76013 467 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 CKMP06732 381 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 C7P10643 843 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 HOXC13P31276 330 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 GMPRP36959 345 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 SMAD3P84022 425 aaKnown RBP8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 SLC18A2Q05940 514 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 CTBP1Q13363 440 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 USP10Q14694 798 aaKnown RBP8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 CTC1Q2NKJ3 1217 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 C6orf163Q5TEZ5 329 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 ATG16L1Q676U5 607 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 KCTD11Q693B1 232 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 SLC39A11Q8N1S5 342 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 CARNMT1Q8N4J0 409 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 BLOC1S5Q8TDH9 187 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 GATA6Q92908 595 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 HIC2Q96JB3 615 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 ZNF184Q99676 751 aaPredicted RBP8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 ATP13A1Q9HD20 1204 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 PFDN4Q9NQP4 134 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 IL37Q9NZH6 218 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 ANGPTL2Q9UKU9 493 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 NEU3Q9UQ49 428 aa8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 MKI67P46013 3256 aaKnown RBP8.96□□□□□ -0.97
MTHFD1-201ENST00000216605 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FAM92AA1XBS5 289 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 BUD23O43709 281 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TBX10O75333 385 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TIMP1P01033 207 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 LRG1P02750 347 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PIRTP0C851 137 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 HDCP19113 662 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 GSTT1P30711 240 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 WDR5P61964 334 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PRAMEP78395 509 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 RING1Q06587 406 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 BCL2A1Q16548 175 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 NADSYN1Q6IA69 706 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PKN3Q6P5Z2 889 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 CCDC117Q8IWD4 279 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ARL14EPQ8N8R7 260 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 DTX3LQ8TDB6 740 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ACMSDQ8TDX5 336 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 RMDN1Q96DB5 314 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 MYEOVQ96EZ4 313 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 SIKE1Q9BRV8 207 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 CINPQ9BW66 212 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 SLC25A51Q9H1U9 297 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 NOL6Q9H6R4 1146 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FRMPD3Q5JV73 1810 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FAM25EA8MYX2 175 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 GLRA3O75311 464 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ALDH1A2O94788 518 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ITGB8P26012 769 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 S100A5P33763 92 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 RFC2P35250 354 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 HALP42357 657 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 NEK3P51956 506 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 DSG1Q02413 1049 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 NIPAL4Q0D2K0 466 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PARP15Q460N3 678 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ZNF362Q5T0B9 420 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TPGS2Q68CL5 300 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PDPK2PQ6A1A2 396 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TXNDC8Q6A555 127 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FSTL4Q6MZW2 842 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 PPP4R4Q6NUP7 873 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FBXO46Q6PJ61 603 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TMEM135Q86UB9 458 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FIBCD1Q8N539 461 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ABTB1Q969K4 478 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 CCDC28BQ9BUN5 200 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 POLR1EQ9GZS1 481 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 RNF38Q9H0F5 515 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 SNX15Q9NRS6 342 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 SLC2A6Q9UGQ3 507 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.98
MTHFD1-201ENST00000216605 A0A096LPK6 155 aa8.95□□□□□ -0.98
MTHFD1-201ENST00000216605 ZCWPW2A0A1B0GU75 182 aa8.95□□□□□ -0.98
MTHFD1-201ENST00000216605 PABPN1LA6NDY0 278 aaKnown RBP8.95□□□□□ -0.98
MTHFD1-201ENST00000216605 CCL22O00626 93 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms