RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ISXQ2M1V0 245 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 LIPIQ6XZB0 460 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 PAF1Q8N7H5 531 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 EDEM3Q9BZQ6 932 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 SYNDIG1Q9H7V2 258 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 USP29Q9HBJ7 922 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 DONSONQ9NYP3 566 aa22.25■■□□□ 1.15
VTI1B-201ENST00000216456 TMEM202A6NGA9 273 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 H3BRJ5 948 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 CD48P09326 243 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 SRP54P61011 504 aaKnown RBP22.24■■□□□ 1.15
VTI1B-201ENST00000216456 SLC25A11Q02978 314 aaKnown RBP22.24■■□□□ 1.15
VTI1B-201ENST00000216456 FIGNQ5HY92 759 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 C3orf38Q5JPI3 329 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 PSTKQ8IV42 348 aaKnown RBP22.24■■□□□ 1.15
VTI1B-201ENST00000216456 OR1E3Q8WZA6 343 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 SMIM14Q96QK8 99 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 PSKH2Q96QS6 385 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 LGR4Q9BXB1 951 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 PCDH18Q9HCL0 1135 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 MRPL47Q9HD33 250 aaKnown RBP22.24■■□□□ 1.15
VTI1B-201ENST00000216456 B4GALT6Q9UBX8 382 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 SATB2Q9UPW6 733 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 ENTPD2Q9Y5L3 495 aa22.24■■□□□ 1.15
VTI1B-201ENST00000216456 MYBL1P10243 752 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 PDX1P52945 283 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 UBASH3AP57075 661 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 ATP13A4Q4VNC1 1196 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 TMCO4Q5TGY1 634 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 LRRC69Q6ZNQ3 347 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 DPPA4Q7L190 304 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 SPACA3Q8IXA5 215 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 PDCD6IPQ8WUM4 868 aaKnown RBP22.23■■□□□ 1.15
VTI1B-201ENST00000216456 LRRN4Q8WUT4 740 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 TRIM11Q96F44 468 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 CCDC3Q9BQI4 270 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 NUP85Q9BW27 656 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 NOD2Q9HC29 1040 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 FGF22Q9HCT0 170 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 KLQ9UEF7 1012 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 SEPT3Q9UH03 358 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 ANAPC7Q9UJX3 599 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 PADI4Q9UM07 663 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 LRP4O75096 1905 aa22.23■■□□□ 1.15
VTI1B-201ENST00000216456 MAFKO60675 156 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 MAP3K6O95382 1288 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 ELFN1P0C7U0 828 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 CTSEP14091 401 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 CR2P20023 1033 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 ACTN2P35609 894 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 ARL4AP40617 200 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 PEX5P50542 639 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 NSUN2Q08J23 767 aaKnown RBP eCLIP22.22■■□□□ 1.15
VTI1B-201ENST00000216456 TRAF2Q12933 501 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 RFTN1Q14699 578 aaPredicted RBP22.22■■□□□ 1.15
VTI1B-201ENST00000216456 AGERQ15109 404 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 FAM182AQ5T1J6 154 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 DENND2CQ68D51 928 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 TMCO3Q6UWJ1 677 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 CCL4L1Q8NHW4 92 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 WDR92Q96MX6 357 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 PRORYQ9H606 182 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 ASCL3Q9NQ33 180 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 DOLKQ9UPQ8 538 aa22.22■■□□□ 1.15
VTI1B-201ENST00000216456 A0A1W2PQJ5 194 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 RRP8O43159 456 aaKnown RBP22.21■■□□□ 1.15
VTI1B-201ENST00000216456 RASGRP1O95267 797 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 PRB1P04280 392 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 GYPCP04921 128 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 IL4RP24394 825 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 GJC1P36383 396 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 TLE3Q04726 772 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 MTM1Q13496 603 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 ZNF235Q14590 738 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 ACOX1Q15067 660 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 NFKBIBQ15653 356 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 BOLA3Q53S33 107 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 FOXR1Q6PIV2 292 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 PTCD2Q8WV60 388 aaKnown RBP22.21■■□□□ 1.15
VTI1B-201ENST00000216456 CCDC74AQ96AQ1 378 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 TBATAQ96M53 351 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 SUDS3Q9H7L9 328 aaPredicted RBP22.21■■□□□ 1.15
VTI1B-201ENST00000216456 POLR1BQ9H9Y6 1135 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 EVA1BQ9NVM1 165 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 IFNKQ9P0W0 207 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 GPR34Q9UPC5 381 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 PTPRQQ9UMZ3 2332 aa22.21■■□□□ 1.15
VTI1B-201ENST00000216456 MGAQ8IWI9 3026 aa22.2■■□□□ 1.15
VTI1B-201ENST00000216456 BAHCC1Q9P281 2608 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 AGRPO00253 132 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 TOR1BO14657 336 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 SERPING1P05155 500 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 CYP1A2P05177 515 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 HTR1BP28222 390 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 SSR1P43307 286 aaKnown RBP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 LSSP48449 732 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 AP1S1P61966 158 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 IHHQ14623 411 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 CNGA3Q16281 694 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 KIF26BQ2KJY2 2108 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms