RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SPDYCQ5MJ68 293 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 C8orf74Q6P047 294 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 PPP1R21Q6ZMI0 780 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 DPPA4Q7L190 304 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 PCGF5Q86SE9 256 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 MCCC1Q96RQ3 725 aaPredicted RBP20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 NEU2Q9Y3R4 380 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 AP3B1O00203 1094 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 TTI1O43156 1089 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 PRLP01236 227 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 CTPS1P17812 591 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 VIPR1P32241 457 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 TAS2R38P59533 333 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 SIM2Q14190 667 aaPredicted RBP20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 QPCTQ16769 361 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 KCTD11Q693B1 232 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 SLC25A41Q8N5S1 370 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 HACD3Q9P035 362 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 B4GALT6Q9UBX8 382 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 MBD1Q9UIS9 605 aaPredicted RBP20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 CACNA1HO95180 2353 aa20.27■□□□□ 0.84
RHBDD3-201ENST00000216085 MEI4A8MW99 385 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 LILRB5O75023 590 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ELFN1P0C7U0 828 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ZNF30P17039 623 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 TPSB2P20231 275 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 NUDT1P36639 197 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 TPSAB1Q15661 275 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 TMEM52BQ4KMG9 183 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 SIRPB2Q5JXA9 342 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 KIAA0895LQ68EN5 471 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 TRIM69Q86WT6 500 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 PRSS33Q8NF86 280 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 LYSMD1Q96S90 227 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 RAB17Q9H0T7 212 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 RAB23Q9ULC3 237 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ITM2BQ9Y287 266 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 UTP11Q9Y3A2 253 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 RNGTTO60942 597 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 SUN1O94901 812 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 AGTP01019 485 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 PRKCGP05129 697 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ALPIP09923 528 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ATXN1LP0C7T5 689 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 BCKDHBP21953 392 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 ADRA1AP35348 466 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 HNF1BP35680 557 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 CCR5P51681 352 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 CDH17Q12864 832 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 SYCP2LQ5T4T6 812 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 RANBP10Q6VN20 620 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 PRR23BQ6ZRT6 265 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 HORMAD1Q86X24 394 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 DNAAF3Q8N9W5 541 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 WRAP53Q9BUR4 548 aaKnown RBP20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 C1QTNF7Q9BXJ2 289 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 DUSP15Q9H1R2 295 aaPredicted RBP20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 TRABDQ9H4I3 376 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 MAGEE1Q9HCI5 957 aa20.26■□□□□ 0.83
RHBDD3-201ENST00000216085 A0A1W2PQU0 124 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 NPIPB15A6NHN6 443 aaPredicted RBP20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 HRO43593 1189 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 FSBPO95073 299 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 SRSF5Q13243 272 aaKnown RBP20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 SGCGQ13326 291 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 SPARCL1Q14515 664 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 SETMARQ53H47 684 aaPredicted RBP20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 SNX19Q92543 992 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 APOL2Q9BQE5 337 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 C6orf106Q9H6K1 298 aaPredicted RBP20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 EML5Q05BV3 1969 aa20.25■□□□□ 0.83
RHBDD3-201ENST00000216085 C1orf232A0A0U1RR37 186 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 PSMD11O00231 422 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 RAD51CO43502 376 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 USP12O75317 370 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 TM7SF2O76062 418 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 CHRNA4P43681 627 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 LIG3P49916 1009 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 TCF15Q12870 199 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 WDR45BQ5MNZ6 344 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 PMS2CLQ68D20 193 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 PPIL6Q8IXY8 311 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 BBOF1Q8ND07 529 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 ATOH1Q92858 354 aaPredicted RBP20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 SNF8Q96H20 258 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 ZC3H10Q96K80 434 aaKnown RBP20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 HSPA12BQ96MM6 686 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 CARD6Q9BX69 1037 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 L2HGDHQ9H9P8 463 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 ARNT2Q9HBZ2 717 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 KCTD5Q9NXV2 234 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 GGT7Q9UJ14 662 aa20.24■□□□□ 0.83
RHBDD3-201ENST00000216085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 EFCAB8A8MWE9 144 aa20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 SMAPO00193 183 aa20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 SPINT1O43278 529 aa20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 LZTS3O60299 673 aaPredicted RBP20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 HEXIM1O94992 359 aaKnown RBP20.23■□□□□ 0.83
RHBDD3-201ENST00000216085 MAGEA6P43360 314 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms