RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SNX32Q86XE0 403 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ACVR1CQ8NER5 493 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 NXNL1Q96CM4 212 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 ASIC4Q96FT7 647 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 RPL10LQ96L21 214 aaKnown RBP13□□□□□ -0.33
PCDHB4-201ENST00000194152 TBATAQ96M53 351 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 EGFL8Q99944 293 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 NAT9Q9BTE0 207 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 GPR63Q9BZJ6 419 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 GDAP2Q9NXN4 497 aa13□□□□□ -0.33
PCDHB4-201ENST00000194152 F8W8V4 182 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 KPNA6O60684 536 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 RHOCP08134 193 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 SEMA5AQ13591 1074 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 SLC9A4Q6AI14 798 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 KIAA2013Q8IYS2 634 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TTC30BQ8N4P2 665 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TSPAN14Q8NG11 270 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TMIGD2Q96BF3 282 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 SERPINB11Q96P15 392 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 CERS4Q9HA82 394 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 LATS2Q9NRM7 1088 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 CDYLQ9Y232 598 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TMEM233B4DJY2 109 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 VILLO15195 856 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TRIM13O60858 407 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 CDH3P22223 829 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 PTPRRQ15256 657 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 UGP2Q16851 508 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TNFAIP8L3Q5GJ75 292 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 SPDYAQ5MJ70 313 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ZNF786Q8N393 782 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 CCDC28BQ9BUN5 200 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ADAM28Q9UKQ2 775 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 AAR2Q9Y312 384 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 TFAP2AP05549 437 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 RPL9P32969 192 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 C4orf22Q6V702 233 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 RBM23Q86U06 439 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 ACBD6Q9BR61 282 aa12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 SMG9Q9H0W8 520 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 UPF3AQ9H1J1 476 aaKnown RBP12.99□□□□□ -0.33
PCDHB4-201ENST00000194152 PRR23AA6NEV1 266 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 AURKAO14965 403 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TIMM44O43615 452 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 KATNA1O75449 491 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TRIM16O95361 564 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 HLA-DQB2P05538 268 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 GEMP55040 296 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CTC1Q2NKJ3 1217 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 KANSL3Q9P2N6 904 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 NUMA1Q14980 2115 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CBFA2T3O75081 653 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 GCATO75600 419 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 NR1H2P55055 460 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 EGFLAMQ63HQ2 1017 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 FUT10Q6P4F1 479 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 FBXL19Q6PCT2 694 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CNSTQ6PJW8 725 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 DENND1AQ8TEH3 1009 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 GLOD4Q9HC38 313 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TRPM5Q9NZQ8 1165 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CCDC167Q9P0B6 97 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PCDHGB4Q9UN71 923 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PCDHGB5Q9Y5G0 923 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 A0A0D9SEW6 157 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PRSS56P0CW18 603 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 XPAP23025 273 aaPredicted RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 SLC5A2P31639 672 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TUFMP49411 452 aaKnown RBP12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 LDLRAP1Q5SW96 308 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 ARMC12Q5T9G4 340 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CYP2R1Q6VVX0 501 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 NAT16Q8N8M0 369 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 COX4I2Q96KJ9 171 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 CDRT15Q96T59 188 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 TLE6Q9H808 572 aa12.98□□□□□ -0.33
PCDHB4-201ENST00000194152 STX7O15400 261 aaKnown RBP12.97□□□□□ -0.33
PCDHB4-201ENST00000194152 SH3BP5O60239 455 aa12.97□□□□□ -0.33
PCDHB4-201ENST00000194152 B4GALT3O60512 393 aa12.97□□□□□ -0.33
PCDHB4-201ENST00000194152 SNX2O60749 519 aa12.97□□□□□ -0.33
PCDHB4-201ENST00000194152 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms