RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR6Y1Q8NGX8 325 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 DNAJB14Q8TBM8 379 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 TLE6Q9H808 572 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 SLC28A3Q9HAS3 691 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 COPG2Q9UBF2 871 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 CIDEBQ9UHD4 219 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 PLIN3O60664 434 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 APOA4P06727 396 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 COX4I1P13073 169 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 C6orf89Q6UWU4 347 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 C11orf74Q86VG3 221 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 C10orf82Q8WW14 230 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 TBATAQ96M53 351 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 NPY6RQ99463 290 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 TBCDQ9BTW9 1192 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 GATA5Q9BWX5 397 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 WDR41Q9HAD4 459 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 DDX18Q9NVP1 670 aaKnown RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 UBA2Q9UBT2 640 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 HEATR9A2RTY3 570 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 TMEM233B4DJY2 109 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 VPS26AO75436 327 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 VAV1P15498 845 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ACADSP16219 412 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 RAD51Q06609 339 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 GK5Q6ZS86 529 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 SLC44A2Q8IWA5 706 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 FBXO39Q8N4B4 442 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 DCUN1D1Q96GG9 259 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 PRPF18Q99633 342 aaKnown RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ECSITQ9BQ95 431 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 HS3ST4Q9Y661 456 aa12.12□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF839A8K0R7 811 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 SYCE1LA8MT33 242 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 GABBR2O75899 941 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 FKBP9O95302 570 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 MPOP05164 745 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TACR2P21452 398 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 BOP1Q14137 746 aaKnown RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 PTPRNQ16849 979 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 FKBP9P1Q75LS8 142 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LENG8Q96PV6 779 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TSEN34Q9BSV6 310 aaKnown RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ZDHHC6Q9H6R6 413 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 GABRB2P47870 512 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 PPP3CCP48454 512 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ACSBG2Q5FVE4 666 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LRRC8BQ6P9F7 803 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ADCK2Q7Z695 626 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 NPWQ8N729 165 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 FNDC5Q8NAU1 212 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LINC01599Q8WXQ3 324 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 EMILIN2Q9BXX0 1053 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TRIM15Q9C019 465 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 GLOD4Q9HC38 313 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HCFC1R1Q9NWW0 138 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CXXC1Q9P0U4 656 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TIMM22Q9Y584 194 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TEX28O15482 410 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 SIN3BO75182 1162 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ST8SIA6P61647 398 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 FPGSQ05932 587 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ARHGAP15Q53QZ3 475 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ZBTB49Q6ZSB9 765 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 DET1Q7L5Y6 550 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 POF1BQ8WVV4 589 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 SLCO2A1Q92959 643 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 DRC3Q9H069 523 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CLPBQ9H078 707 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 ZNHIT2Q9UHR6 403 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 MAGEA13PA6NCF6 341 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 HDAC3O15379 428 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 RBP1P09455 135 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LINC00032P0C843 101 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 PRMT2P55345 433 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TAS2R39P59534 338 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms