RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ITPRIPL1Q6GPH6 555 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TRIM69Q86WT6 500 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SLC25A41Q8N5S1 370 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 CXorf40AQ8TE69 158 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 MAGOHBQ96A72 148 aaKnown RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 FEM1CQ96JP0 617 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 SERAC1Q96JX3 654 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 TRIB3Q96RU7 358 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 FRMD8P1Q9BZ68 369 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-201ENST00000011473 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 BPTFQ12830 3046 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 DMXL1Q9Y485 3027 aa12.1□□□□□ -0.47
SYPL1-201ENST00000011473 A0A0J9YYE9 177 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 CFAP69A5D8W1 941 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 ANKRD66B4E2M5 251 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 RAD51BO15315 384 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 GCATO75600 419 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 TRBC1P01850 177 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 SLC4A1P02730 911 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 CFIP05156 583 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 C6P13671 934 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
SYPL1-201ENST00000011473 CLDN2P57739 230 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 RPS21P63220 83 aaKnown RBP12.09□□□□□ -0.47
SYPL1-201ENST00000011473 ELP6Q0PNE2 266 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 QPCTQ16769 361 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 WDR45BQ5MNZ6 344 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
SYPL1-201ENST00000011473 USP45Q70EL2 814 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 SYT12Q8IV01 421 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 C1orf216Q8TAB5 229 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 RTP4Q96DX8 246 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 SCRN2Q96FV2 425 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 NAP1L3Q99457 506 aaPredicted RBP12.09□□□□□ -0.47
SYPL1-201ENST00000011473 FSD1LQ9BXM9 530 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 SLC17A9Q9BYT1 436 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 PIH1D1Q9NWS0 290 aaKnown RBP12.09□□□□□ -0.47
SYPL1-201ENST00000011473 GON4LQ3T8J9 2241 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 PLXND1Q9Y4D7 1925 aa12.09□□□□□ -0.47
SYPL1-201ENST00000011473 GFRA3O60609 400 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 AGTP01019 485 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 ELFN1P0C7U0 828 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 CA4P22748 312 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 CD27P26842 260 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 VPS41P49754 854 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 CCR5P51681 352 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.47
SYPL1-201ENST00000011473 CNGA3Q16281 694 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 P3H1Q32P28 736 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 LRRC66Q68CR7 880 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 KIAA1161Q6NSJ0 714 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 NEK5Q6P3R8 708 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 RUBCNQ92622 972 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 LOXL4Q96JB6 756 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 ADGRE3Q9BY15 652 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 DDX47Q9H0S4 455 aaKnown RBP12.08□□□□□ -0.47
SYPL1-201ENST00000011473 PCED1AQ9H1Q7 454 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 TM9SF3Q9HD45 589 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 PARD6AQ9NPB6 346 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 AASDHPPTQ9NRN7 309 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 SHOC2Q9UQ13 582 aa12.08□□□□□ -0.47
SYPL1-201ENST00000011473 A0A1W2PQ67 120 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 BCAT2O15382 392 aaPredicted RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 ATXN1LP0C7T5 689 aaKnown RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 CSNK1EP49674 416 aaKnown RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 TMEM52BQ4KMG9 183 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 SIRPB2Q5JXA9 342 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 CCDC137Q6PK04 289 aaKnown RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 RFLNAQ6ZTI6 216 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 MCCC1Q96RQ3 725 aaPredicted RBP12.08□□□□□ -0.48
SYPL1-201ENST00000011473 FICDQ9BVA6 458 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 VPS45Q9NRW7 570 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 RXFP3Q9NSD7 469 aa12.08□□□□□ -0.48
SYPL1-201ENST00000011473 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 LOC285095A0A1B0GVY8 99 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 CAPN8A6NHC0 703 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 AURKAO14965 403 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
SYPL1-201ENST00000011473 TM7SF2O76062 418 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 HEXIM1O94992 359 aaKnown RBP12.07□□□□□ -0.48
SYPL1-201ENST00000011473 CLDN7O95471 211 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 GM2AP17900 193 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 VIPR1P32241 457 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 RPL22P35268 128 aaKnown RBP12.07□□□□□ -0.48
SYPL1-201ENST00000011473 COILP38432 576 aaPredicted RBP12.07□□□□□ -0.48
SYPL1-201ENST00000011473 GRIA4P48058 902 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 SUOXP51687 545 aa12.07□□□□□ -0.48
SYPL1-201ENST00000011473 SGCGQ13326 291 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms