RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SLC35G1Q2M3R5 365 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 GALNT4Q8N4A0 578 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF461Q8TAF7 563 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 KCTD13Q8WZ19 329 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 FCF1Q9Y324 198 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 H3BM21 787 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 FSBPO95073 299 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 NUDT14O95848 222 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF865P0CJ78 1059 aaPredicted RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 PABPC1P11940 636 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 GNSP15586 552 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 CDKN2BP42772 138 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 DSC2Q02487 901 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ADGRF1Q5T601 910 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 TRPC4APQ8TEL6 797 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 VMP1Q96GC9 406 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 PPP3R2Q96LZ3 170 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 FBXL18Q96ME1 805 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 OLFM3Q96PB7 478 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ELAC1Q9H777 363 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 KRT84Q9NSB2 600 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 CROTQ9UKG9 612 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC12A4Q9UP95 1085 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 GSTM1P09488 218 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 FCGR1AP12314 374 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 HSPA13P48723 471 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 AP5B1Q2VPB7 878 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 C16orf46Q6P387 395 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC39A5Q6ZMH5 540 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 TRIM69Q86WT6 500 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 CIR1Q86X95 450 aaPredicted RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ATXN2LQ8WWM7 1075 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 CLP1Q92989 425 aaKnown RBP10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ACSS3Q9H6R3 686 aa10.39□□□□□ -0.75
NIPAL3-201ENST00000003912 ADGRA3Q8IWK6 1321 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ALS2Q96Q42 1657 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 AGRPO00253 132 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC28A1O00337 649 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ALPPL2P10696 532 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ADH5P11766 374 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CSF2RAP15509 400 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 GPD2P43304 727 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CCT8P50990 548 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 FRG1Q14331 258 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CRYMQ14894 314 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CERCAMQ5T4B2 595 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 DUPD1Q68J44 220 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 FOXR1Q6PIV2 292 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 UBE2R2Q712K3 238 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 TCAIMQ8N3R3 496 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 NTAN1Q96AB6 310 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 MRPS33Q9Y291 106 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 KDM3BQ7LBC6 1761 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 UBXN8O00124 270 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 FPGTO14772 594 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ALOX15BO15296 676 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 OR10H2O60403 315 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 RASGRP1O95267 797 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF23P17027 643 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 BHLHB9Q6PI77 547 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF621Q6ZSS3 439 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 SCUBE1Q8IWY4 988 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 IGSF21Q96ID5 467 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 INSL5Q9Y5Q6 135 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 RASSF10A6NK89 507 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ADAMTS3O15072 1205 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 AVILO75366 819 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 AP2A1O95782 977 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CYBAP13498 195 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 PKMP14618 531 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 MTHFRP42898 656 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CLK3P49761 638 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 NAGLUP54802 743 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 POLE2P56282 527 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 IFI35P80217 286 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 PIWIL4Q7Z3Z4 852 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 TAF8Q7Z7C8 310 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 C17orf64Q86WR6 236 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 KCTD4Q8WVF5 259 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 BTN2A2Q8WVV5 523 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ZNF75CPQ92670 426 aaPredicted RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 MRPL48Q96GC5 212 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 WRAP53Q9BUR4 548 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 RHOJQ9H4E5 214 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ADPRHL2Q9NX46 363 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 NUP188Q5SRE5 1749 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 WDR47O94967 919 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 EPN2O95208 641 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 CNPP09543 421 aaKnown RBP10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 BLKP51451 505 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 RIPOR1Q6ZS17 1223 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 ZCCHC23Q6ZST2 131 aa10.38□□□□□ -0.75
NIPAL3-201ENST00000003912 GPRIN3Q6ZVF9 776 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms