RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Gm12794L7MTS5 483 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ap2a1P17426 977 aaKnown RBP12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Gria1P23818 907 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Elk4P41158 430 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Col28a1Q2UY11 1141 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ggnbp1Q6K1E7 370 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Slitrk2Q810C0 846 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 NfascQ810U3 1240 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ubp1Q811S7 540 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ptpn7Q8BUM3 359 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Swi5Q8K3D3 89 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ahi1Q8K3E5 1047 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Mapre2Q8R001 326 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 AslQ91YI0 464 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Rsl24d1Q99L28 163 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Lsm12Q9D0R8 195 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 MecrQ9DCS3 373 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Slc13a2Q9ES88 586 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Il22bQ9JJY8 179 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Mpp5Q9JLB2 675 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Gm35911A0A1D5RLS7 214 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Plk2P53351 682 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Cab39Q06138 341 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Colec11Q3SXB8 272 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Zmym5Q3U2E2 627 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Sfmbt2Q5DTW2 938 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Q8BL95 290 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Pyhin1Q8BV49 420 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Lrrc19Q8BZT5 364 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ergic3Q9CQE7 383 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Nos1apQ9D3A8 503 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Kdelc1Q9JHP7 502 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 VapbQ9QY76 243 aaKnown RBP12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Nav1Q8CH77 1875 aa12.54□□□□□ -0.4
Sdf4-201ENSMUST00000050078 S100zB9EJL3 99 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ecm1Q61508 559 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 MtdhQ80WJ7 579 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Krr1Q8BGA5 380 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Vps26bQ8C0E2 336 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Gsdmc3Q8CB12 480 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Calhm4Q8CE93 315 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Mrpl9Q99N94 265 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Cmc1Q9CPZ8 106 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Slc25a11Q9CR62 314 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Wdr55Q9CX97 388 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Exoc2Q9D4H1 924 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Cdh22Q9WTP5 813 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Tnfsf13bQ9WU72 309 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Vmn2r38G3UYA8 861 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Vmn2r33K7N705 861 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Dcpp3L7N259 170 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ncam2O35136 837 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Dnase1l3O55070 310 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Slc16a10Q3U9N9 512 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Kctd21Q3URF8 260 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Mon1aQ6PDG8 556 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ap1s3Q7TN05 154 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Fnip2Q80TD3 1108 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Glis1Q8K1M4 789 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 HpgdQ8VCC1 269 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ssu72Q9CY97 194 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Fundc1Q9DB70 155 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Olfr703Q9EPF5 319 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Gmeb1Q9JL60 562 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Skint11A7XV14 364 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Olfr564E9PWA8 316 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Zscan4bE9Q3G0 505 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Shmt1P50431 478 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Meaf6Q2VPQ9 191 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Q3TYS2 187 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 KhsrpQ3U0V1 748 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 DazlQ64368 298 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Zswim9Q6DI92 447 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Bnip1Q6QD59 228 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Pnma8aQ80VM8 430 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Psd4Q8BLR5 1005 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ago3Q8CJF9 860 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Sh3glb2Q8R3V5 400 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Pcdhb19Q91Y01 801 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 TmlheQ91ZE0 421 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Hmg20aQ9DC33 346 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Sae1Q9R1T2 350 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Tle6Q9WVB3 581 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Arrdc4A0A0B4J1F4 415 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 A0A1Y7VIU7 259 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 ErfP70459 551 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 GnasQ6R0H7 1133 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Tmem198Q8BG75 360 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 GskipQ8BGR8 139 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Slc44a3Q921V7 656 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Atad1Q9D5T0 361 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Actrt2Q9D9L5 377 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 HaghlQ9DB32 283 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 PolhQ9JJN0 694 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Piwil1Q9JMB7 862 aa12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Maged1Q9QYH6 775 aaKnown RBP12.53□□□□□ -0.4
Sdf4-201ENSMUST00000050078 JhyE9Q793 770 aa12.52□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ebf3O08791 596 aa12.52□□□□□ -0.4
Sdf4-201ENSMUST00000050078 Ptpn9O35239 593 aa12.52□□□□□ -0.4
Sdf4-201ENSMUST00000050078 PuraP42669 321 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms