RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Fam20bQ8VCS3 409 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Lysmd3Q99LE3 305 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tex12Q9CR81 123 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ints11Q9CWS4 600 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tex22Q9D9U4 189 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 HemgnQ9ERZ0 503 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm17535J3KMR8 224 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zfp457L7N1X4 647 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pias1O88907 651 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 EgfP01132 1217 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc10a3P21129 473 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Stat5aP42230 793 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Epb42P49222 691 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ccr5P51682 354 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ankrd27Q3UMR0 1048 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mfhas1Q3V1N1 1048 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arhgap1Q5FWK3 439 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 G2e3Q5RJY2 716 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Galnt10Q6P9S7 603 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PapolgQ6PCL9 739 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc6a15Q8BG16 729 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nckap1lQ8K1X4 1134 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mrgpra2Q91WW4 305 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr703Q9EPF5 319 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 VapbQ9QY76 243 aaKnown RBP10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 DnpepQ9Z2W0 473 aa10.34□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Kcnt2D3Z649 1135 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ddx43D3Z6P9 646 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vmn2r38G3UYA8 861 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Vmn2r33K7N705 861 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 AmacrO09174 381 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pbx3O35317 434 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pou2f2Q00196 463 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mks1Q5SW45 561 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mfsd3Q5U419 412 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Larp4bQ6A0A2 741 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ap1s3Q7TN05 154 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Epb41l5Q8BGS1 731 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lrrc24Q8BHA1 521 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Q8BHN7 327 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zfp120Q8BZW4 436 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mark4Q8CIP4 752 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ipo13Q8K0C1 963 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ccdc59Q8R2N0 240 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sult5a1Q91X36 291 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lpin1Q91ZP3 924 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 ArskQ9D2L1 553 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Clvs1Q9D4C9 354 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Il22bQ9JJY8 179 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fads2Q9Z0R9 444 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 AfdnQ9QZQ1 1820 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sppl2cA2A6C4 690 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Stk16O88697 305 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cpa3P15089 417 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ccnb1P24860 430 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gbx2P48031 348 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Lypla1P97823 230 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pou1f1Q00286 291 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Siah1bQ06985 282 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Hmgxb4Q80Y32 594 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Man2a2Q8BRK9 1152 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Adgrg1Q8K209 687 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 CenpnQ9CZW2 337 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Fam3aQ9D8T0 230 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 HaghlQ9DB32 283 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Hipk3Q9ERH7 1192 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Cntn6Q9JMB8 1028 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ly6iQ9WU67 134 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Keap1Q9Z2X8 624 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ssxb6A2BI74 170 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gml2G5E8L7 176 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Htr3aP23979 487 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 S100a13P97352 98 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zbtb48Q1H9T6 681 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Sp140Q6NSQ5 534 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rasa4Q6PFQ7 802 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ifnl3Q8CGK6 193 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 LipmQ8K2A6 422 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Ints10Q8K2A7 710 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Smg8Q8VE18 991 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Zmat2Q9CPW7 199 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 2310003L06RikQ9CV82 495 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Glipr1l1Q9DAG6 236 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mpp6Q9JLB0 553 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Grm3Q9QYS2 879 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Klhl18A0A0G2JGN5 579 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Adamts6D3Z1A5 1117 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 ShdO88834 343 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Spp1P10923 294 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Anxa6P14824 673 aaKnown RBP10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Gria1P23818 907 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Mkl2P59759 1080 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Pdcd1Q02242 288 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Spryd7Q3TFQ1 196 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 KdsrQ6GV12 332 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Otud6aQ6IE21 290 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Tas2r129Q7M709 320 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Rbbp8Q80YR6 893 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Q810S2 196 aa10.33□□□□□ -0.76
Ccdc40-201ENSMUST00000035935 Reep1Q8BGH4 201 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms