RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MESDQ14696 234 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 NR0B2Q15466 257 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 LRRC73Q5JTD7 316 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 EFHC1Q5JVL4 640 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 IGF2-ASQ6U949 168 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 CCDC81Q6ZN84 652 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 RBM44Q6ZP01 1051 aaKnown RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 B3GNT8Q7Z7M8 397 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 DAAM2Q86T65 1068 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 RNF10Q8N5U6 811 aaKnown RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 BTBD6Q96KE9 485 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 ASNSD1Q9NWL6 643 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 ARHGEF38Q9NXL2 777 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 IPO11Q9UI26 975 aaKnown RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 FCF1Q9Y324 198 aaKnown RBP10.16□□□□□ -0.78
PHGDH-222ENST00000641587 PCDHGA8Q9Y5G5 932 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 HS3ST3A1Q9Y663 406 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 CAPN6Q9Y6Q1 641 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
PHGDH-222ENST00000641587 GRID2IPA4D2P6 1211 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SIGLEC16A6NMB1 481 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 MYO1FO00160 1098 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 AGRPO00253 132 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 BUB1BO60566 1050 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 ZMPSTE24O75844 475 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 MTA2O94776 668 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 WISP1O95388 367 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 GPD1P21695 349 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 PSMA2P25787 234 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 ITGB7P26010 798 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 L1CAMP32004 1257 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 NOS2P35228 1153 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 IGFALSP35858 605 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SSR1P43307 286 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 RECQLP46063 649 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 RABIFP47224 123 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CXCR3P49682 368 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SULT1E1P49888 294 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CLCN6P51797 869 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 PFN3P60673 137 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 RPL7AP62424 266 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CCDC15Q0P6D6 951 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 TGIF1Q15583 401 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 PRRT3Q5FWE3 981 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 KIAA1161Q6NSJ0 714 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SLC26A9Q7LBE3 791 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CLEC14AQ86T13 490 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SETD3Q86TU7 594 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 DCP2Q8IU60 420 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 PHACTR4Q8IZ21 702 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SLC35F6Q8N357 371 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 EMC1Q8N766 993 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 EXD3Q8N9H8 876 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 TRIM58Q8NG06 486 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 JOSD2Q8TAC2 188 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF592Q92610 1267 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 VOPP1Q96AW1 172 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 PPP1R16AQ96I34 528 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 TBCBQ99426 244 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 NPY6RQ99463 290 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 IL12RB2Q99665 862 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CCDC3Q9BQI4 270 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SPON2Q9BUD6 331 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 LRRC61Q9BV99 259 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 BOCQ9BWV1 1114 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 TRIM7Q9C029 511 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CLPBQ9H078 707 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 ZDHHC6Q9H6R6 413 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 ZNF212Q9UDV6 495 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 APOBEC3BQ9UH17 382 aaKnown RBP10.15□□□□□ -0.78
PHGDH-222ENST00000641587 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 CSNK1G3Q9Y6M4 447 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 SCN8AQ9UQD0 1980 aa10.15□□□□□ -0.78
PHGDH-222ENST00000641587 TCRBV5S1A1TA0A578 114 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 TMEM191CA6NGB0 347 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 DRGXA6NNA5 263 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-222ENST00000641587 FPGTO14772 594 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 SPOPO43791 374 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 SRGAP2O75044 1071 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 FTCDO95954 541 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 CD160O95971 181 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 TNNT1P13805 278 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 HGFP14210 728 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 ITIH2P19823 946 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 OR1E1P30953 314 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 SDC4P31431 198 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 RFC1P35251 1148 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-222ENST00000641587 ACVRL1P37023 503 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 SCNN1AP37088 669 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 HADHBP55084 474 aaKnown RBP10.14□□□□□ -0.79
PHGDH-222ENST00000641587 DEUP1Q05D60 604 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 TCEAL1Q15170 157 aa10.14□□□□□ -0.79
PHGDH-222ENST00000641587 LINC00303Q3SY05 128 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms