RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 LCA5Q86VQ0 697 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 NUDCD3Q8IVD9 361 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 OR6P1Q8NGX9 317 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 HDAC10Q969S8 669 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 SIRPGQ9P1W8 387 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 TLK1Q9UKI8 766 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ANKRD6Q9Y2G4 727 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ARL5AQ9Y689 179 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 PLIN3O60664 434 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 IL1BP01584 269 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 BPGMP07738 259 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 TCF3P15923 654 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 BGNP21810 368 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ABCG1P45844 678 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 LEPRP48357 1165 aaKnown RBP16.53■□□□□ 0.24
PHGDH-216ENST00000641375 AP1S1P61966 158 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 USP10Q14694 798 aaKnown RBP16.53■□□□□ 0.24
PHGDH-216ENST00000641375 TAF1BQ53T94 588 aaPredicted RBP16.53■□□□□ 0.24
PHGDH-216ENST00000641375 NSMCE3Q96MG7 304 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 TSSK1BQ9BXA7 367 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 CAB39LQ9H9S4 337 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 FCF1Q9Y324 198 aaKnown RBP16.53■□□□□ 0.24
PHGDH-216ENST00000641375 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
PHGDH-216ENST00000641375 ANKRD66B4E2M5 251 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 TOP3BO95985 862 aaKnown RBP16.52■□□□□ 0.24
PHGDH-216ENST00000641375 PRLP01236 227 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 C2P06681 752 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 F7P08709 466 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-216ENST00000641375 HNRNPH1P31943 449 aaKnown RBP16.52■□□□□ 0.24
PHGDH-216ENST00000641375 MAPK8P45983 427 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 CSRP3P50461 194 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 MNAT1P51948 309 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 SHHQ15465 462 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 TAF1AQ15573 450 aaPredicted RBP16.52■□□□□ 0.24
PHGDH-216ENST00000641375 ZNF697Q5TEC3 545 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 RAPH1Q70E73 1250 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 OTOAQ7RTW8 1153 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
PHGDH-216ENST00000641375 CILP2Q8IUL8 1156 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 OTUD6BQ8N6M0 293 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 E2F7Q96AV8 911 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 OTUB2Q96DC9 234 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 CLEC4EQ9ULY5 219 aa16.52■□□□□ 0.24
PHGDH-216ENST00000641375 FAM95CA0A1B0GW59 222 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 C2orf81A6NN90 581 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 RPP40O75818 363 aaKnown RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 MT-CO1P00395 513 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CD70P32970 193 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 POU4F1Q01851 419 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 ZNF77Q15935 545 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 GLT6D1Q7Z4J2 308 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PTAR1Q7Z6K3 402 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CLEC14AQ86T13 490 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 LPCAT1Q8NF37 534 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 ZNF707Q96C28 371 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 TSNARE1Q96NA8 513 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PIDD1Q9HB75 910 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 EMCNQ9ULC0 261 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CCDC189A1A4V9 331 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 HAUS5O94927 633 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 GLP2RO95838 553 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PENKP01210 267 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PRKCGP05129 697 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PDHA1P08559 390 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 PIRTP0C851 137 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 TROVE2P10155 538 aaKnown RBP eCLIP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 COL6A2P12110 1019 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 STMN1P16949 149 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CRABP2P29373 138 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 CSNK1DP48730 415 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 ARSDP51689 593 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 RAB10P61026 200 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 NTHL1P78549 312 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 TMPRSS15P98073 1019 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 SF3A3Q12874 501 aaKnown RBP eCLIP16.51■□□□□ 0.231e-9■■■■□ 22.2
PHGDH-216ENST00000641375 USP4Q13107 963 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 MRNIPQ6NTE8 343 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 IRF7Q92985 503 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 DNAJC1Q96KC8 554 aaKnown RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 TBATAQ96M53 351 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 MECRQ9BV79 373 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 TMEM216Q9P0N5 145 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
PHGDH-216ENST00000641375 KCTD3Q9Y597 815 aa16.51■□□□□ 0.23
PHGDH-216ENST00000641375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.5■□□□□ 0.23
PHGDH-216ENST00000641375 PRAMEF12O95522 483 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 PROCP04070 461 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 CLCN5P51795 746 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 SLC12A2P55011 1212 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 TRAF2Q12933 501 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 DLG2Q15700 870 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 C16orf46Q6P387 395 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 TMEM25Q86YD3 366 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 ACVR1CQ8NER5 493 aa16.5■□□□□ 0.23
PHGDH-216ENST00000641375 GPR150Q8NGU9 434 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms