RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 PROSCO94903 275 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 HMBSP08397 361 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 CLK3P49761 638 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 BMPR2Q13873 1038 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SSX2Q16385 188 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 CYP51A1Q16850 503 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 GPRC6AQ5T6X5 926 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 BHLHB9Q6PI77 547 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 MOXD1Q6UVY6 613 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ASB12Q8WXK4 309 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 C12orf66Q96MD2 445 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PFDN5Q99471 154 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 MROQ9BYG7 248 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 MTMR12Q9C0I1 747 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PAK6Q9NQU5 681 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 GPATCH2LQ9NWQ4 482 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ARMCX1Q9P291 453 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RAP2CQ9Y3L5 183 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SNX8Q9Y5X2 465 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 FSCN2O14926 492 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ATG7O95352 703 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RPLP0P05388 317 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SNRPB2P08579 225 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PSMA3P25788 255 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SSTR1P30872 391 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ABCG1P45844 678 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RPS9P46781 194 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RPS5P46782 204 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 POLD2P49005 469 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 FADDQ13158 208 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 USP10Q14694 798 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 STILQ15468 1287 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PSMD5Q16401 504 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ANGEL2Q5VTE6 544 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 TCEAL6Q6IPX3 200 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ANKS1BQ7Z6G8 1248 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 WDR49Q8IV35 697 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 OR8K3Q8NH51 312 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 BRSK1Q8TDC3 778 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PTCD2Q8WV60 388 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 FICDQ9BVA6 458 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF518BQ9C0D4 1074 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 INTS10Q9NVR2 710 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 MKS1Q9NXB0 559 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 SSR3Q9UNL2 185 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RIC1Q4ADV7 1423 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 NFAT5O94916 1531 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 TUBAL3A6NHL2 446 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 DFFAO00273 331 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RNASEH1O60930 286 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 TSPAN19P0C672 248 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 MATN1P21941 496 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 FASTKQ14296 549 aaKnown RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 C11orf88Q6PI97 169 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 LSMEM2Q8N112 164 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 LZTR1Q8N653 840 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 KDM1BQ8NB78 822 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 HAVCR1Q96D42 359 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 PRMT6Q96LA8 375 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 FN3KQ9H479 309 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 B3GNT2Q9NY97 397 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 RGS17Q9UGC6 210 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-227ENST00000640648 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
NECAP1-227ENST00000640648 UBA6A0AVT1 1052 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 TFE3P19532 575 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 PTX3P26022 381 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 DALRD3Q5D0E6 543 aaKnown RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 TFDP3Q5H9I0 405 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 NDUFAF5Q5TEU4 345 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 IL31Q6EBC2 164 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 TYW3Q6IPR3 259 aaKnown RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 LIN54Q6MZP7 749 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 AMIGO1Q86WK6 493 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 SRFBP1Q8NEF9 429 aaKnown RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 SEC14L1Q92503 715 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF669Q96BR6 464 aaPredicted RBP8.3□□□□□ -1.08
NECAP1-227ENST00000640648 DNAJC19Q96DA6 116 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 RNFT2Q96EX2 444 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 DNAJC18Q9H819 358 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 ANKEF1Q9NU02 776 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF222Q9UK12 451 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 OR6C70A6NIJ9 312 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 SLITRK3O94933 977 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 CSPG5O95196 566 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 VAPBO95292 243 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 S100A8P05109 93 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 SHMT1P34896 483 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 SULT1E1P49888 294 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 TMEM62Q0P6H9 643 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 ACOX1Q15067 660 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 ZNF404Q494X3 552 aa8.3□□□□□ -1.08
NECAP1-227ENST00000640648 DHRS4L2Q6PKH6 230 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms