RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TBCDQ9BTW9 1192 aa17.66■□□□□ 0.42
SCARB2-223ENST00000640640 FFAR3O14843 346 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GPR42O15529 346 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 NDST3O95803 873 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TACR2P21452 398 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 PIK3R1P27986 724 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GLUD2P49448 558 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 HNRNPDQ14103 355 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GPRIN3Q6ZVF9 776 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SPPL2AQ8TCT8 520 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SUSD6Q92537 303 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 ELMO1Q92556 727 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TRMT13Q9NUP7 481 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SYN3O14994 580 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 MPSTP25325 297 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 POU1F1P28069 291 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SCNN1AP37088 669 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GRIA3P42263 894 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 RUNX1T1Q06455 604 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SEMA5AQ13591 1074 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 FSTL4Q6MZW2 842 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TMEM199Q8N511 208 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SCAMP5Q8TAC9 235 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 ITFG1Q8TB96 612 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 DPF3Q92784 378 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 NXNL1Q96CM4 212 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TBATAQ96M53 351 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 PCYT2Q99447 389 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 UGT2B28Q9BY64 529 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SPAG4Q9NPE6 437 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 FETUBQ9UGM5 382 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TRAF6Q9Y4K3 522 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 MYH11P35749 1972 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CORO1AP31146 461 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 PRKG2Q13237 762 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 ZNF621Q6ZSS3 439 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SYT12Q8IV01 421 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TMEM132CQ8N3T6 1108 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 DNAJB14Q8TBM8 379 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 MTFMTQ96DP5 389 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 LINGO1Q96FE5 620 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 RMND5BQ96G75 393 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 NR1H4Q96RI1 486 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 BBS2Q9BXC9 721 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 IGSF9Q9P2J2 1179 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CACNG4Q9UBN1 327 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 MRPS23Q9Y3D9 190 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 MTF2Q9Y483 593 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 ALDH1A2O94788 518 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TNFAIP8O95379 198 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GPR15P49685 360 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CREMQ03060 361 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 SGCGQ13326 291 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CCDC85BQ15834 202 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 PREPLQ4J6C6 727 aaPredicted RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 OLFML2BQ68BL8 750 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 ESRP1Q6NXG1 681 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 FAM228AQ86W67 206 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 RTL3Q8N8U3 475 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 GLIS1Q8NBF1 620 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 FAM13CQ8NE31 585 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 DBF4BQ8NFT6 615 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CD99L2Q8TCZ2 262 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 NMD3Q96D46 503 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 COPS8Q99627 209 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 INVSQ9Y283 1065 aa17.65■□□□□ 0.42
SCARB2-223ENST00000640640 TDRKHQ9Y2W6 561 aaKnown RBP17.65■□□□□ 0.42
SCARB2-223ENST00000640640 CCDC88AQ3V6T2 1871 aa17.64■□□□□ 0.42
SCARB2-223ENST00000640640 DNM1LO00429 736 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 GSC2O15499 205 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 TCEA3O75764 348 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 HNRNPCP07910 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 HECTD2Q5U5R9 776 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 KIAA0408Q6ZU52 694 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 BANPQ8N9N5 519 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 B4GALNT2Q8NHY0 566 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 C9orf16Q9BUW7 83 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 TMCO1Q9UM00 188 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 ZNF711Q9Y462 761 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 CA12O43570 354 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 RRM2P31350 389 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 PRKCZQ05513 592 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 DET1Q7L5Y6 550 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 CUZD1Q86UP6 607 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 NPLOC4Q8TAT6 608 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 SLC35F5Q8WV83 523 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 UPF1Q92900 1129 aaKnown RBP eCLIP17.64■□□□□ 0.416e-7■■■□□ 18.3
SCARB2-223ENST00000640640 TCAF1Q9Y4C2 921 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 SPACA6W5XKT8 324 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 EOMESO95936 686 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 SP100P23497 879 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 FBXW4P57775 412 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 MPP1Q00013 466 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 NRF1Q16656 503 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 MAB21L3Q8N8X9 362 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 NTAN1Q96AB6 310 aa17.64■□□□□ 0.41
SCARB2-223ENST00000640640 LEF1Q9UJU2 399 aaPredicted RBP17.64■□□□□ 0.41
SCARB2-223ENST00000640640 PRMT5O14744 637 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms