RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 CCDC166P0CW27 439 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ATP5F1P24539 256 aaPredicted RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 GCKP35557 465 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 HK2P52789 917 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 SMARCB1Q12824 385 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 PTPRCAPQ14761 206 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ARMC3Q5W041 872 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ACAD11Q709F0 780 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 CCDC124Q96CT7 223 aaKnown RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 PDFQ9HBH1 243 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 CDYLQ9Y232 598 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ARL5AQ9Y689 179 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 LTA4HP09960 611 aaKnown RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 PIRTP0C851 137 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 KCNA5P22460 613 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 PRDX6P30041 224 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 SH2D4BQ5SQS7 431 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 AGAP9Q5VTM2 703 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 PIWIL4Q7Z3Z4 852 aaKnown RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 MYLK4Q86YV6 388 aaPredicted RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 OR7D4Q8NG98 312 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 OR52K2Q8NGK3 314 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ZNF333Q96JL9 665 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 TBATAQ96M53 351 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 COMMD8Q9NX08 183 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 VTI1BQ9UEU0 232 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 ARHGAP26Q9UNA1 814 aa13.42□□□□□ -0.26
SPIN3-235ENST00000640104 MTF2Q9Y483 593 aaPredicted RBP13.42□□□□□ -0.26
SPIN3-235ENST00000640104 GREB1Q4ZG55 1949 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 NPHS1O60500 1241 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ATP6V1C1P21283 382 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 PIK3R1P27986 724 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 PLK1P53350 603 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 NSUN2Q08J23 767 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 PPM1LQ5SGD2 360 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ACBD5Q5T8D3 534 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 IL31Q6EBC2 164 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 PIM3Q86V86 326 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 PDCD6IPQ8WUM4 868 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 SCG3Q8WXD2 468 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 SCLYQ96I15 445 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 MARK4Q96L34 752 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ZNF512Q96ME7 567 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 GTSE1Q9NYZ3 720 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 DNMT3LQ9UJW3 386 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 CRYL1Q9Y2S2 319 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 VWA7Q9Y334 891 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ZFP37Q9Y6Q3 630 aaPredicted RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ACSL4O60488 711 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 GJB5O95377 273 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 S1PR4O95977 384 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ANPEPP15144 967 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 CDKN2DP55273 166 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 KLC3Q6P597 504 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 MAB21L3Q8N8X9 362 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 KDM1BQ8NB78 822 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
SPIN3-235ENST00000640104 FEM1CQ96JP0 617 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 ANGPTL2Q9UKU9 493 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 FIS1Q9Y3D6 152 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
SPIN3-235ENST00000640104 EIF4E1BA6NMX2 242 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 A8MT66 165 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 HOXA2O43364 376 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 CCNT2O60583 730 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 GOT2P00505 430 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 SLC4A1P02730 911 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 FGF1P05230 155 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 DNAJB13P59910 316 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 PFKPQ01813 784 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 GNA12Q03113 381 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 TBL3Q12788 808 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 RPS27LQ71UM5 84 aaKnown RBP13.4□□□□□ -0.26
SPIN3-235ENST00000640104 SNX32Q86XE0 403 aa13.4□□□□□ -0.26
SPIN3-235ENST00000640104 OR13C4Q8NGS5 318 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms