RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RPS24P62847 133 aaKnown RBP21.63■■□□□ 1.05
CLN6-224ENST00000638076 HECTD3Q5T447 861 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLN6-224ENST00000638076 TSPAN17Q96FV3 270 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 RSRC1Q96IZ7 334 aaKnown RBP21.63■■□□□ 1.05
CLN6-224ENST00000638076 TBATAQ96M53 351 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 ZNF570Q96NI8 536 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 NUF2Q9BZD4 464 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 POMKQ9H5K3 350 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 VWA7Q9Y334 891 aa21.63■■□□□ 1.05
CLN6-224ENST00000638076 GRID2O43424 1007 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 S1PR4O95977 384 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 SERPINF2P08697 491 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 LTA4HP09960 611 aaKnown RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 CCDC166P0CW27 439 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 GLDCP23378 1020 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 ATN1P54259 1190 aaPredicted RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 CDH4P55283 916 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 SESN3P58005 492 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 PTPRCAPQ14761 206 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 NAA25Q14CX7 972 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 ARHGEF6Q15052 776 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 CCDC6Q16204 474 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 TECRLQ5HYJ1 363 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 AGAP9Q5VTM2 703 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 KIAA1841Q6NSI8 718 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.62■■□□□ 1.051e-6■■■■■ 32.3
CLN6-224ENST00000638076 OSBPL1AQ9BXW6 950 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 NCKIPSDQ9NZQ3 722 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 NEMP2A6NFY4 417 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 SEC24AO95486 1093 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 EPOP01588 193 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 CXCL10P02778 98 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 ATP5F1P24539 256 aaPredicted RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 EPHA3P29320 983 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 MAP2K2P36507 400 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 LSM12Q3MHD2 195 aaKnown RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 RALGPS1Q5JS13 557 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 GIMAP7Q8NHV1 300 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 PDCD6IPQ8WUM4 868 aaKnown RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 OVCA2Q8WZ82 227 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 DNAJC1Q96KC8 554 aaKnown RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 CEP295NLQ96MC4 621 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 PRICKLE1Q96MT3 831 aaPredicted RBP21.62■■□□□ 1.05
CLN6-224ENST00000638076 PANX3Q96QZ0 392 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 SPON2Q9BUD6 331 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 BACE2Q9Y5Z0 518 aa21.62■■□□□ 1.05
CLN6-224ENST00000638076 A0A088AWK7 358 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 H3BNC9 293 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 PIRTP0C851 137 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 PRMT2P55345 433 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 KLF10Q13118 480 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 SLC14A2Q15849 920 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 C6orf163Q5TEZ5 329 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 ALG1LQ6GMV1 187 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 RIPOR1Q6ZS17 1223 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 FAM43BQ6ZT52 329 aaPredicted RBP21.61■■□□□ 1.05
CLN6-224ENST00000638076 TRIM67Q6ZTA4 783 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 LMNTD2Q8IXW0 634 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 BBS5Q8N3I7 341 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 DTX3LQ8TDB6 740 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 DEFB118Q96PH6 123 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 MGME1Q9BQP7 344 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 GKN1Q9NS71 199 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 STOML1Q9UBI4 398 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 VTI1BQ9UEU0 232 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 TRIM17Q9Y577 477 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 F8W8V4 182 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 SLCO1B7G3V0H7 640 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 NPHS1O60500 1241 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 KLKB1P03952 638 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 HMGA1P17096 107 aaKnown RBP21.61■■□□□ 1.05
CLN6-224ENST00000638076 CDKN2DP55273 166 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 ACVR1Q04771 509 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 PEX6Q13608 980 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 BTG3Q14201 252 aaPredicted RBP21.61■■□□□ 1.05
CLN6-224ENST00000638076 TRMT5Q32P41 509 aaKnown RBP21.61■■□□□ 1.05
CLN6-224ENST00000638076 KLC3Q6P597 504 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 FRMD7Q6ZUT3 714 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 ANKRD49Q8WVL7 239 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 SCG3Q8WXD2 468 aaKnown RBP21.61■■□□□ 1.05
CLN6-224ENST00000638076 IGSF21Q96ID5 467 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 UBXN10Q96LJ8 280 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 CLSTN3Q9BQT9 956 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 CWH43Q9H720 699 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 CRYL1Q9Y2S2 319 aa21.61■■□□□ 1.05
CLN6-224ENST00000638076 GOT2P00505 430 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 COX4I1P13073 169 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 SGSHP51688 502 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 DNAJB13P59910 316 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 C1orf146Q5VVC0 180 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 KLHDC10Q6PID8 442 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 PIWIL4Q7Z3Z4 852 aaKnown RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 RNF168Q8IYW5 571 aaPredicted RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 OR13C4Q8NGS5 318 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 CFAP61Q8NHU2 1237 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 BRSK1Q8TDC3 778 aa21.6■■□□□ 1.05
CLN6-224ENST00000638076 CINPQ9BW66 212 aaPredicted RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 UBA2Q9UBT2 640 aaPredicted RBP21.6■■□□□ 1.05
CLN6-224ENST00000638076 SEPT3Q9UH03 358 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms