RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 B3GALNT2Q8NCR0 500 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 EZH1Q92800 747 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RCN3Q96D15 328 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 HDAC11Q96DB2 347 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 HAPLN3Q96S86 360 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GPR22Q99680 433 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TBL1YQ9BQ87 522 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 FAM49AQ9H0Q0 323 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TTYH1Q9H313 450 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ZNF395Q9H8N7 513 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 COPS7BQ9H9Q2 264 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CNGB3Q9NQW8 809 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 DDIT4Q9NX09 232 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GDAP2Q9NXN4 497 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SNTG2Q9NY99 539 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RABL2AQ9UBK7 228 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GTF2IRD1Q9UHL9 959 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CROTQ9UKG9 612 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 EMCNQ9ULC0 261 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 LHX6Q9UPM6 363 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 AK5Q9Y6K8 562 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 A0A087WXM4 84 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 FAM95CA0A1B0GW59 222 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 HMX2A2RU54 273 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 H3BRB1 525 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PSMD12O00232 456 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ANGPT2O15123 496 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CRTAMO95727 393 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PGK2P07205 417 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CDK4P11802 303 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ERCC2P18074 760 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TFEBP19484 476 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MPSTP25325 297 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MAGEA12P43365 314 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TKTL1P51854 596 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ATN1P54259 1190 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 NAGLUP54802 743 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 BNIP2Q12982 314 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 FASTKQ14296 549 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 KIF19Q2TAC6 998 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 LSM12Q3MHD2 195 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM240Q5SV17 173 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RWDD4Q6NW29 188 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PKN3Q6P5Z2 889 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 BORAQ6PGQ7 559 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GPR141Q7Z602 305 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM135Q86UB9 458 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM192Q8IY95 271 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TMEM130Q8N3G9 435 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TSPAN14Q8NG11 270 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 OR6J1Q8NGC5 347 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SHKBP1Q8TBC3 707 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 HM13Q8TCT9 377 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SORT1Q99523 831 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MCMBPQ9BTE3 642 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RHOBTB2Q9BYZ6 727 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TUT1Q9H6E5 874 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 WDCPQ9H6R7 721 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MINDY3Q9H8M7 445 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MRM3Q9HC36 420 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SPAG4Q9NPE6 437 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PIN4Q9Y237 131 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 NME7Q9Y5B8 376 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 KCNK1O00180 336 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 MRASO14807 208 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GABBR2O75899 941 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RECQL4O94761 1208 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 JCHAINP01591 159 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PYGLP06737 847 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 NCAM1P13591 858 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ATP6V1B1P15313 513 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 NFKB1P19838 968 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 GLDCP23378 1020 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TKTP29401 623 aaKnown RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ADCYAP1R1P41586 468 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 DNAJB13P59910 316 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TUBA4AP68366 448 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SCAPQ12770 1279 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 DLG1Q12959 904 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 TUBB3Q13509 450 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CYTH1Q15438 398 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SLC9B1Q4ZJI4 515 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PPM1JQ5JR12 505 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CES3Q6UWW8 571 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 LRRC69Q6ZNQ3 347 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 DHFR2Q86XF0 187 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 CCDC117Q8IWD4 279 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 BBS5Q8N3I7 341 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 FBXO27Q8NI29 283 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 IRGQQ8WZA9 623 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 AZIN2Q96A70 460 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 SDCCAG3Q96C92 435 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 ASB9Q96DX5 294 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 C9orf16Q9BUW7 83 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 B3GNT5Q9BYG0 378 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 PBX4Q9BYU1 374 aa4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RSPH9Q9H1X1 276 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-214ENST00000637038 RSL24D1Q9UHA3 163 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms