RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C20orf96Q9NUD7 363 aaPredicted RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 ZNF212Q9UDV6 495 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 ZFP37Q9Y6Q3 630 aaPredicted RBP11.61□□□□□ -0.55
CLN6-217ENST00000636964 COMMD3-BMI1R4GMX3 469 aa11.61□□□□□ -0.55
CLN6-217ENST00000636964 DRGXA6NNA5 263 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ACSL4O60488 711 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ANXA9O76027 345 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ITGA2BP08514 1039 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 TROVE2P10155 538 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLN6-217ENST00000636964 CD86P42081 329 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 NPY2RP49146 381 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 SGSHP51688 502 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 PDE1BQ01064 536 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 RING1Q06587 406 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 IHHQ14623 411 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 DNAJB7Q7Z6W7 309 aaPredicted RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 SATL1Q86VE3 508 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 QPCTLQ9NXS2 382 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 TMED5Q9Y3A6 229 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 BPTFQ12830 3046 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 TM9SF1O15321 606 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 TEX28O15482 410 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 BUD23O43709 281 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 CACNG3O60359 315 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 CORO1AP31146 461 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 RFC2P35250 354 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 PGGT1BP53609 377 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 CDC16Q13042 620 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ANO4Q32M45 955 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 PPM1JQ5JR12 505 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 DENND5AQ6IQ26 1287 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 C16orf46Q6P387 395 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 MARK2Q7KZI7 788 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 OR7D4Q8NG98 312 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 SLC22A12Q96S37 553 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ECSITQ9BQ95 431 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 SPON2Q9BUD6 331 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 IL22Q9GZX6 179 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 IARS2Q9NSE4 1012 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 DKK3Q9UBP4 350 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 TPP1O14773 563 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 CCDC22O60826 627 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 ALDOAP04075 364 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 LAG3P18627 525 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 RENBPP51606 427 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 GEMP55040 296 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 WNT3AP56704 352 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 HNRNPDQ14103 355 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 TMEM53Q6P2H8 277 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 RAPH1Q70E73 1250 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 CYS1Q717R9 158 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 C16orf59Q7L2K0 433 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 NECAB2Q7Z6G3 386 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 STRA8Q7Z7C7 330 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 LINC00523Q86TU6 105 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 MRPL17Q9NRX2 175 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 SLC2A6Q9UGQ3 507 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
CLN6-217ENST00000636964 HBS1LQ9Y450 684 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 PRRC2BQ5JSZ5 2229 aaKnown RBP11.6□□□□□ -0.55
CLN6-217ENST00000636964 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 STC2O76061 302 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLN6-217ENST00000636964 PABPC4LP0CB38 370 aaKnown RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 BGNP21810 368 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 ETV4P43268 484 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SERPINB9P50453 376 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 LBX1P52954 281 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SEPT6Q14141 434 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 TPGS2Q68CL5 300 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 CMC1Q7Z7K0 106 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 DDX53Q86TM3 631 aaKnown RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 KCNMB4Q86W47 210 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SPATA24Q86W54 205 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 PGBD5Q8N414 524 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 TMEM199Q8N511 208 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SKA1Q96BD8 255 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 PANX3Q96QZ0 392 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 HEY2Q9UBP5 337 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SOX13Q9UN79 622 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 MYO7AQ13402 2215 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 FAM237BA0A1B0GVD1 139 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 ANPEPP15144 967 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 GLDCP23378 1020 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 CPA2P48052 419 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 SLC11A2P49281 568 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 KPNA1P52294 538 aaPredicted RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 SERINC3Q13530 473 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 RAB33AQ14088 237 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 VEPH1Q14D04 833 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 ESRP1Q6NXG1 681 aaKnown RBP11.59□□□□□ -0.55
CLN6-217ENST00000636964 LRRC49Q8IUZ0 686 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 PNPLA1Q8N8W4 532 aa11.59□□□□□ -0.55
CLN6-217ENST00000636964 PDZD8Q8NEN9 1154 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms