RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ATP6V1E2	Q96A05	226 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	FAM84A	Q96KN4	292 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	C8orf48	Q96LL4	319 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	ADI1	Q9BV57	179 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	WDR41	Q9HAD4	459 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	EFCAB1	Q9HAE3	211 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	ANKH	Q9HCJ1	492 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	AASDHPPT	Q9NRN7	309 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	PNPO	Q9NVS9	261 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	SNTG2	Q9NY99	539 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	UGT2A1	Q9Y4X1	527 aa		10.85	□□□□□ -0.67
CHD2-223	ENST00000636306	TRPM7	Q96QT4	1865 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	TMEM191C	A6NGB0	347 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SAC3D1	A6NKF1	404 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306		A6NL46	340 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	LACTBL1	A8MY62	500 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	KBTBD13	C9JR72	458 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	CCRL2	O00421	344 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ARHGAP33	O14559	1287 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SHOX	O15266	292 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	TMCC2	O75069	709 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	GLRA3	O75311	464 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SNAI1	O95863	264 aa	Predicted RBP	10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT1	P04264	644 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ITGB3	P05106	788 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	NFIC	P08651	508 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT7	P08729	469 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	BMP1	P13497	986 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ARF4	P18085	180 aa	Predicted RBP	10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	RRM2	P31350	389 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	RPL22	P35268	128 aa	Known RBP	10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SERPINB10	P48595	397 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	COPZ1	P61923	177 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	IFITM3	Q01628	133 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ART3	Q13508	389 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	KRR1	Q13601	381 aa	Known RBP	10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	PEX6	Q13608	980 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	TRIM25	Q14258	630 aa	Known RBP	10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	CDK10	Q15131	360 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ZFYVE27	Q5T4F4	411 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	PPM1N	Q8N819	430 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	C1orf127	Q8N9H9	656 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SNX19	Q92543	992 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ELMO3	Q96BJ8	720 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	SORT1	Q99523	831 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	BEGAIN	Q9BUH8	593 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	KATNAL1	Q9BW62	490 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	MINDY3	Q9H8M7	445 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	FANCE	Q9HB96	536 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF229	Q9UJW7	825 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	MAU2	Q9Y6X3	613 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	MGAM	O43451	1857 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	NRCAM	Q92823	1304 aa		10.84	□□□□□ -0.67
CHD2-223	ENST00000636306	hCG_1818297	A0A087WSY0	165 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM25A	B3EWG3	89 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM25C	B3EWG5	89 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM25G	B3EWG6	89 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	LYPLA1	O75608	230 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	TOMM70	O94826	608 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	GSR	P00390	522 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	IFNB1	P01574	187 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	VTN	P04004	478 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	HMGCR	P04035	888 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	GJB1	P08034	283 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MPP1	Q00013	466 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	TAGLN	Q01995	201 aa	Known RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	PTPN11	Q06124	597 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MMRN1	Q13201	1228 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC12A1	Q13621	1099 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	POU6F1	Q14863	301 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MTX3	Q5HYI7	312 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	BROX	Q5VW32	411 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	HMBOX1	Q6NT76	420 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	NOTUM	Q6P988	496 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC27A1	Q6PCB7	646 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	ZCCHC23	Q6ZST2	131 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	ERMP1	Q7Z2K6	904 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	RALGPS2	Q86X27	583 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	RAVER1	Q8IY67	606 aa	Known RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SFRP1	Q8N474	314 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	BEST2	Q8NFU1	509 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MARVELD3	Q96A59	401 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	HPDL	Q96IR7	371 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MCEE	Q96PE7	176 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	C9orf16	Q9BUW7	83 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	NOL6	Q9H6R4	1146 aa	Known RBP	10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	C12orf4	Q9NQ89	552 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SMOX	Q9NWM0	555 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	MTRR	Q9UBK8	725 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	UST	Q9Y2C2	406 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SLC27A5	Q9Y2P5	690 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	RAD54B	Q9Y620	910 aa		10.83	□□□□□ -0.68
CHD2-223	ENST00000636306	SMIM35	A0A1B0GVV1	85 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	MANSC4	A6NHS7	340 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SAGE2P	A6NJ88	616 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306		C9IYK1	514 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TNPO2	O14787	897 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZW10	O43264	779 aa		10.82	□□□□□ -0.68

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