RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 RP9Q8TA86 221 aaKnown RBP7.54□□□□□ -1.2
LINC01108-202ENST00000635227 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 HVCN1Q96D96 273 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 CDCA5Q96FF9 252 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 SPAG5Q96R06 1193 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 LXNQ9BS40 222 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 DPCDQ9BVM2 203 aaPredicted RBP7.54□□□□□ -1.2
LINC01108-202ENST00000635227 COLEC11Q9BWP8 271 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 TMEM206Q9H813 350 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 SLC38A10Q9HBR0 1119 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
LINC01108-202ENST00000635227 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 TBC1D7Q9P0N9 293 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 GUCA1BQ9UMX6 200 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 FRMD4BQ9Y2L6 1034 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 SIP14410 1827 aa7.54□□□□□ -1.2
LINC01108-202ENST00000635227 LRRC3CA6NJW4 275 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 CLCA1A8K7I4 914 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 H0YCG3 227 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 QSOX1O00391 747 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 LCA5LO95447 670 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 NR3C1P04150 777 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 KRT13P13646 458 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SCP2P22307 547 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 NTSR1P30989 418 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 PSMC2P35998 433 aaKnown RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 PGDP52209 483 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 NHLH1Q02575 133 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 BRD3Q15059 726 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 EXOC3L4Q17RC7 722 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SUPT20HL1Q3ZLR7 823 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 RINT1Q6NUQ1 792 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 GBP6Q6ZN66 633 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 RRAGAQ7L523 313 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 DPP9Q86TI2 863 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SYCP3Q8IZU3 236 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 KRT222Q8N1A0 295 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 OR2C3Q8N628 320 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 RUBCNQ92622 972 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SARAFQ96BY9 339 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 ZC3H10Q96K80 434 aaKnown RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 CCDC138Q96M89 665 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 BBC3Q96PG8 261 aaPredicted RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 PRR25Q96S07 402 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 WDR24Q96S15 920 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 HSD17B14Q9BPX1 270 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 VN1R3Q9BXE9 311 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 FSD1LQ9BXM9 530 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 RPAP3Q9H6T3 665 aaPredicted RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 PLCB1Q9NQ66 1216 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 HEYLQ9NQ87 328 aaPredicted RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 AGPAT5Q9NUQ2 364 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 FBXL5Q9UKA1 691 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SCAF8Q9UPN6 1271 aaKnown RBP7.53□□□□□ -1.2
LINC01108-202ENST00000635227 EXOC7Q9UPT5 735 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 USP22Q9UPT9 525 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 DOCK5Q9H7D0 1870 aa7.53□□□□□ -1.2
LINC01108-202ENST00000635227 SPTBN4Q9H254 2564 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 LRRC53A6NM62 1247 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 K7ENM7 598 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 AP4M1O00189 453 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 AREL1O15033 823 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 GFPT2O94808 682 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 LYPLA2O95372 231 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 HNRNPCP07910 306 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 H2AFXP16104 143 aaPredicted RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 TCP1P17987 556 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 GPD1P21695 349 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 QARSP47897 775 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 GATMP50440 423 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 ZNF131P52739 623 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 BACE1P56817 501 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 TIRAPP58753 221 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 NANOS3P60323 173 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 E2F1Q01094 437 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 RAPGEF1Q13905 1077 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 CTTNQ14247 550 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 PCID2Q5JVF3 399 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 TMEM31Q5JXX7 168 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 SYCP2LQ5T4T6 812 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 ARHGEF16Q5VV41 709 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 FBXO38Q6PIJ6 1188 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 WDR59Q6PJI9 974 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 CATSPERGQ6ZRH7 1159 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 C1orf186Q6ZWK4 172 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 OTUD6AQ7L8S5 288 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 RD3Q7Z3Z2 195 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 SMAP1Q8IYB5 467 aaPredicted RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 FAM186BQ8IYM0 893 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 CPXCR1Q8N123 301 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 RNF10Q8N5U6 811 aaKnown RBP7.52□□□□□ -1.21
LINC01108-202ENST00000635227 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
LINC01108-202ENST00000635227 GJA10Q969M2 543 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms