RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PABPC3Q9H361 631 aaKnown RBP8.58□□□□□ -1.04
SGMS1-211ENST00000626236 LRRC40Q9H9A6 602 aa8.58□□□□□ -1.04
SGMS1-211ENST00000626236 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
SGMS1-211ENST00000626236 EML5Q05BV3 1969 aa8.58□□□□□ -1.04
SGMS1-211ENST00000626236 LOC285095A0A1B0GVY8 99 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 A0A1W2PP55 124 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 A0A1W2PQ67 120 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TCRBV7S3A2A0A539 114 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ESYT3A0FGR9 886 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 FZD6O60353 706 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 RNASEH2AO75792 299 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TMEM63AO94886 807 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 SEC31AO94979 1220 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 APBB3O95704 486 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PRLP01236 227 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PRKCGP05129 697 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ADRB3P13945 408 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 CTPS1P17812 591 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TPSB2P20231 275 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 XPAP23025 273 aaPredicted RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 IVDP26440 423 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ADRA1AP35348 466 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 DRD3P35462 400 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 CHRNA4P43681 627 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 RPL21P46778 160 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PXNP49023 591 aaPredicted RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 NEK3P51956 506 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ITGA8P53708 1063 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ZBTB16Q05516 673 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 CNTN1Q12860 1018 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 CALCOCO2Q13137 446 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 KCNJ11Q14654 390 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TPSAB1Q15661 275 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 SLC1A5Q15758 541 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TTC31Q49AM3 519 aaPredicted RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 SIRPB2Q5JXA9 342 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 DUPD1Q68J44 220 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 NAPEPLDQ6IQ20 393 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 FBXL19Q6PCT2 694 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 BRAT1Q6PJG6 821 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PPP1R21Q6ZMI0 780 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ERN2Q76MJ5 926 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 BMP8AQ7Z5Y6 402 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ZSWIM9Q86XI8 627 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 KLHDC8BQ8IXV7 354 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 HDDC3Q8N4P3 179 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 CAMKK1Q8N5S9 505 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 MDGA1Q8NFP4 955 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 HCAR2Q8TDS4 363 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PIH1D2Q8WWB5 315 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 RMDN1Q96DB5 314 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ECHDC3Q96DC8 303 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TRIB3Q96RU7 358 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 OMDQ99983 421 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 HDAC8Q9BY41 377 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 TPSD1Q9BZJ3 242 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 EIF2B3Q9NR50 452 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 PIH1D1Q9NWS0 290 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 FBXL12Q9NXK8 326 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 DKK3Q9UBP4 350 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 DMGDHQ9UI17 866 aaKnown RBP8.57□□□□□ -1.04
SGMS1-211ENST00000626236 ANAPC5Q9UJX4 755 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 SCML1Q9UN30 329 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 NCKAP1Q9Y2A7 1128 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 LRRK1Q38SD2 2015 aa8.57□□□□□ -1.04
SGMS1-211ENST00000626236 NCOR1O75376 2440 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 SCN8AQ9UQD0 1980 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 TSPAN11A1L157 253 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 UPK3BL1B0FP48 263 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 BHMG1C9JSJ3 638 aaPredicted RBP8.56□□□□□ -1.04
SGMS1-211ENST00000626236 UPK3BL2E5RIL1 263 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 GOLGA8MH3BSY2 632 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 K7ESF4 209 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 NDC80O14777 642 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 SUN1O94901 812 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 PAPSS2O95340 614 aaPredicted RBP8.56□□□□□ -1.04
SGMS1-211ENST00000626236 NDST3O95803 873 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 EPOP01588 193 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 FGF1P05230 155 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 ALPIP09923 528 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 ATXN1LP0C7T5 689 aaKnown RBP8.56□□□□□ -1.04
SGMS1-211ENST00000626236 TIMP2P16035 220 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 ITIH2P19823 946 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 HLA-DPA1P20036 260 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 P2RY2P41231 377 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 GRIA1P42261 906 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 MAGEA6P43360 314 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 GRIA4P48058 902 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 TPMTP51580 245 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 RPL26P61254 145 aaKnown RBP8.56□□□□□ -1.04
SGMS1-211ENST00000626236 SEMG2Q02383 582 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
SGMS1-211ENST00000626236 MTM1Q13496 603 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 TRADDQ15628 312 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 QPCTQ16769 361 aa8.56□□□□□ -1.04
SGMS1-211ENST00000626236 UGP2Q16851 508 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms