RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 CERCAMQ5T4B2 595 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 ZNF776Q68DI1 518 aaPredicted RBP16.71■□□□□ 0.27
CCNA1-203ENST00000625767 ANO7Q6IWH7 933 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 PPP1R21Q6ZMI0 780 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 PAF1Q8N7H5 531 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 TRIM56Q9BRZ2 755 aaKnown RBP16.71■□□□□ 0.27
CCNA1-203ENST00000625767 CASS4Q9NQ75 786 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 SPO11Q9Y5K1 396 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 DNAH14Q0VDD8 3507 aa16.71■□□□□ 0.27
CCNA1-203ENST00000625767 A0A1W2PP55 124 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 GOLGA6CA6NDK9 693 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 ERI2A8K979 691 aaKnown RBP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 ANKRD66B4E2M5 251 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 AURKAO14965 403 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 GOLGA6DP0CG33 693 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 CNTN1Q12860 1018 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 MSLNQ13421 630 aaPredicted RBP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 HLTFQ14527 1009 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 GRM3Q14832 879 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 HP1BP3Q5SSJ5 553 aaPredicted RBP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 NAPEPLDQ6IQ20 393 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 PCGF5Q86SE9 256 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 DSG4Q86SJ6 1040 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 HOOK3Q86VS8 718 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 SPEM1Q8N4L4 309 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 DNAAF3Q8N9W5 541 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 LRIG1Q96JA1 1093 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 WDR83Q9BRX9 315 aaKnown RBP16.7■□□□□ 0.26
CCNA1-203ENST00000625767 OSBPL1AQ9BXW6 950 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 FAM114A2Q9NRY5 505 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 GOLGA6AQ9NYA3 693 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 SHOC2Q9UQ13 582 aa16.7■□□□□ 0.26
CCNA1-203ENST00000625767 TSPAN11A1L157 253 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 FAM86C2PA6NEL3 165 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 C1QTNF3-AMACRE9PGA6 284 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 RNASEH1O60930 286 aaKnown RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 ITGB7P26010 798 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 P2RY2P41231 377 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 EPHB1P54762 984 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 FASTKD3Q14CZ7 662 aaKnown RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 UGP2Q16851 508 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 CCDC38Q502W7 563 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 CFAP58Q5T655 872 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TSPAN33Q86UF1 283 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 IFT20Q8IY31 132 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 HDDC3Q8N4P3 179 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TMEM105Q8N8V8 129 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 MCUQ8NE86 351 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 SIPA1Q96FS4 1042 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 EBF1Q9UH73 591 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 A0A0J9YYE9 177 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 CCDC78A2IDD5 438 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 NPIPB15A6NHN6 443 aaPredicted RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 PSMD3O43242 534 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 BUD23O43709 281 aaKnown RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 ATG13O75143 517 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 EPOP01588 193 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TRBC1P01850 177 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 FAM153BP0C7A2 387 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 MGAT1P26572 445 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 HNF1BP35680 557 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 MAGEA3P43357 314 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 DGKEP52429 567 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 CDK16Q00536 496 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 POU6F1Q14863 301 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 FAM153CQ494X1 144 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 PIP5KL1Q5T9C9 394 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 AGBL4Q5VU57 503 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 LRRC8BQ6P9F7 803 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TSSK4Q6SA08 328 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TTC7BQ86TV6 843 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TSTD1Q8NFU3 115 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 MYRIPQ8NFW9 859 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 COL25A1Q9BXS0 654 aaPredicted RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 PARD6BQ9BYG5 372 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 ARNT2Q9HBZ2 717 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 POLMQ9NP87 494 aaPredicted RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 PCDH12Q9NPG4 1184 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 SYBUQ9NX95 663 aa16.69■□□□□ 0.26
CCNA1-203ENST00000625767 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
CCNA1-203ENST00000625767 GOLGA8CPA6NN73 597 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 UPK3BL1B0FP48 263 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 UPK3BL2E5RIL1 263 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 RNASEH2AO75792 299 aaKnown RBP16.68■□□□□ 0.26
CCNA1-203ENST00000625767 ADH1BP00325 375 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 SLC4A1P02730 911 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 DNTTP04053 509 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 FGF1P05230 155 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 ADRB3P13945 408 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 C5AR1P21730 350 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 CA4P22748 312 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 LHCGRP22888 699 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 GRIA4P48058 902 aa16.68■□□□□ 0.26
CCNA1-203ENST00000625767 TAS2R38P59533 333 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms