RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 TUBE1Q9UJT0 475 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 CCPG1Q9ULG6 757 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 AGTPBP1Q9UPW5 1226 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 NFE2L3Q9Y4A8 694 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ENTPD2Q9Y5L3 495 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 SYNRGQ9UMZ2 1314 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 PAPPA2Q9BXP8 1791 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 ECM29Q5VYK3 1845 aa4.34□□□□□ -1.71
ATRX-209ENST00000623242 UQCRHLA0A096LP55 91 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 FAM237AA0A1B0GTK4 181 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 HMX3A6NHT5 357 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SLC38A8A6NNN8 435 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 BTBD19C9JJ37 291 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 H0YCG3 227 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 KRT86O43790 486 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 CALUO43852 315 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 UQCRHP07919 91 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 CCT6AP40227 531 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 HMGA2P52926 109 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 INHBEP58166 350 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 RAE1P78406 368 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 SETQ01105 290 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 LRRC63Q05C16 580 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.729e-7■□□□□ 11
ATRX-209ENST00000623242 BIRC3Q13489 604 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 FHL2Q14192 279 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SYCP1Q15431 976 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 FAM187BQ17R55 369 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 QRICH1Q2TAL8 776 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TBC1D25Q3MII6 688 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 GALNTL6Q49A17 601 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 CCDC40Q4G0X9 1142 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TEX35Q5T0J7 233 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TSTD2Q5T7W7 516 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ATPAF1Q5TC12 328 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 JAKMIP3Q5VZ66 844 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ISM2Q6H9L7 571 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SNRNP48Q6IEG0 339 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 SHC4Q6S5L8 630 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 MTHFD1LQ6UB35 978 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 MOXD1Q6UVY6 613 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 OLFML1Q6UWY5 402 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 CYP26C1Q6V0L0 522 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 RFX8Q6ZV50 586 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 RAB11FIP2Q7L804 512 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 BCDIN3DQ7Z5W3 292 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 TTC30AQ86WT1 665 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 PLA2G4DQ86XP0 818 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ZNF354CQ86Y25 554 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 CSGALNACT2Q8N6G5 542 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ANKRD13CQ8N6S4 541 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SIMC1Q8NDZ2 872 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 GPRC5AQ8NFJ5 357 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 GOLGA5Q8TBA6 731 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SPPL3Q8TCT6 385 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TBCKQ8TEA7 893 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 WDR60Q8WVS4 1066 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 C12orf42Q96LP6 360 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 TRAPPC9Q96Q05 1148 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ALS2CR12Q96Q35 445 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 SNX18Q96RF0 628 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 MMS19Q96T76 1030 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 XPO4Q9C0E2 1151 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 DNAI2Q9GZS0 605 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 MAF1Q9H063 256 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ABHD16BQ9H3Z7 469 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 RIOX1Q9H6W3 641 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 ELAC1Q9H777 363 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 JMJD4Q9H9V9 463 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 CGNQ9P2M7 1197 aaKnown RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 SERGEFQ9UGK8 458 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 FBXO2Q9UK22 296 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
ATRX-209ENST00000623242 C19orf53Q9UNZ5 99 aaPredicted RBP4.33□□□□□ -1.72
ATRX-209ENST00000623242 FNDC1Q4ZHG4 1894 aaPredicted RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 LAMA4Q16363 1823 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FOCADQ5VW36 1801 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 ABCB11O95342 1321 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 KCNJ18B7U540 433 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 VWA5AO00534 786 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 CETN3O15182 167 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 RAMP2O60895 175 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 C1QL1O75973 258 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SLPIP03973 132 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 HNRNPCP07910 306 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATRX-209ENST00000623242 SNHG28P0DPA3 235 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 CKMT1AP12532 417 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 HSD3B1P14060 373 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 ATF7P17544 494 aaPredicted RBP4.32□□□□□ -1.72
ATRX-209ENST00000623242 GAP43P17677 238 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 MUTP22033 750 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 SCP2P22307 547 aa4.32□□□□□ -1.72
ATRX-209ENST00000623242 GALNSP34059 522 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms