RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CCDC166P0CW27 439 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PSEN1P49768 467 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 SKOR1P84550 965 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PDCD2Q16342 344 aaPredicted RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 MANEALQ5VSG8 457 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PKN3Q6P5Z2 889 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 MARK2Q7KZI7 788 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 MFSD6LQ8IWD5 586 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PIANPQ8IYJ0 282 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
VPS11-208ENST00000621676 ARRDC2Q8TBH0 407 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 GANCQ8TET4 914 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 ACOX2Q99424 681 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 PLCD4Q9BRC7 762 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 OSBPL1AQ9BXW6 950 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
VPS11-208ENST00000621676 ZNF236Q9UL36 1845 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 FAM95CA0A1B0GW59 222 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 SIX3O95343 332 aaPredicted RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 PEX11BO96011 259 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 CA5AP35218 305 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 PIK3CGP48736 1102 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 SEMA3AQ14563 771 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 CYTH1Q15438 398 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 TMCO4Q5TGY1 634 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 SNX30Q5VWJ9 437 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 DPY19L3Q6ZPD9 716 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 FAM124AQ86V42 546 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 EIF1ADQ8N9N8 165 aaKnown RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 MDGA1Q8NFP4 955 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 ZFRQ96KR1 1074 aaKnown RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 BOCQ9BWV1 1114 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 TSSK1BQ9BXA7 367 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 GPAMQ9HCL2 828 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 GIMAP2Q9UG22 337 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 TRHDEQ9UKU6 1024 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 MICAL3Q7RTP6 2002 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 NIPSNAP2O75323 286 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 CYBBP04839 570 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 MMP2P08253 660 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 ARNTP27540 789 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 MSX2P35548 267 aaPredicted RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 TPGS2Q68CL5 300 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 TIGD7Q6NT04 549 aaPredicted RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 SPATA21Q7Z572 469 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 C12orf40Q86WS4 652 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 C2orf73Q8N5S3 287 aaPredicted RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 BANPQ8N9N5 519 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 FOXJ1Q92949 421 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 SPATA17Q96L03 361 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 SLC6A17Q9H1V8 727 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 WDR55Q9H6Y2 383 aaPredicted RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
VPS11-208ENST00000621676 MOSPD1Q9UJG1 213 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 HAO1Q9UJM8 370 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 GVINP1Q7Z2Y8 2422 aa10.59□□□□□ -0.71
VPS11-208ENST00000621676 CLDN11O75508 207 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 ASMTLO95671 621 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 MYL2P10916 166 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 TPSB2P20231 275 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 GP5P40197 560 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 TPSAB1Q15661 275 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 PLA2G4EQ3MJ16 856 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 PCID2Q5JVF3 399 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 PSAPL1Q6NUJ1 521 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 UMODL1-AS1Q8N2C9 162 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 BBS5Q8N3I7 341 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 BEND7Q8N7W2 519 aaPredicted RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 ANKRD49Q8WVL7 239 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 IL12RB2Q99665 862 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 OLFM1Q99784 485 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 IL22Q9GZX6 179 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 SLC25A51Q9H1U9 297 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 CACNA2D2Q9NY47 1150 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 KLHL14Q9P2G3 628 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 ARHGAP10A1A4S6 786 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 E9PBE3 544 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 KLHL41O60662 606 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 LUC7L3O95232 432 aaKnown RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 PTPN2P17706 415 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 CLCN4P51793 760 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 AQP5P55064 265 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 CDH4P55283 916 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 RANBP10Q6VN20 620 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 ATG14Q6ZNE5 492 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 LZTR1Q8N653 840 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 FRMD1Q8N878 549 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 RSPRY1Q96DX4 576 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 RTP4Q96DX8 246 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 ZNF317Q96PQ6 595 aaPredicted RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 FCRL5Q96RD9 977 aa10.58□□□□□ -0.72
VPS11-208ENST00000621676 FRMD8P1Q9BZ68 369 aaPredicted RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
VPS11-208ENST00000621676 XPR1Q9UBH6 696 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms