RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 WDR41Q9HAD4 459 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 GLOD4Q9HC38 313 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 CYP4F12Q9HCS2 524 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 SPATS2LQ9NUQ6 558 aaKnown RBP4.36□□□□□ -1.71
SEC22B-202ENST00000618538 FAM105AQ9NUU6 356 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 MPP6Q9NZW5 540 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 MARCH4Q9P2E8 410 aaPredicted RBP4.36□□□□□ -1.71
SEC22B-202ENST00000618538 SFMBT1Q9UHJ3 866 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 CPA4Q9UI42 421 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 VPS28Q9UK41 221 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 PSMD13Q9UNM6 376 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 ST3GAL5Q9UNP4 418 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 SLC45A1Q9Y2W3 748 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 TCAF1Q9Y4C2 921 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 PCDHGA7Q9Y5G6 932 aa4.36□□□□□ -1.71
SEC22B-202ENST00000618538 MYO16Q9Y6X6 1858 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SCN10AQ9Y5Y9 1956 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 A0A1B0GTL3 188 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MAGEB16A2A368 324 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 C17orf102A2RUQ5 167 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 RGSL1A5PLK6 1076 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 OR51F1A6NGY5 319 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 LRRC14BA6NHZ5 514 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 A8MT66 165 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PPP6CO00743 305 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CFLARO15519 480 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 XPOTO43592 962 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 AP1G1O43747 822 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 DDHD2O94830 711 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CRTAMO95727 393 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MT-CO1P00395 513 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 OR4Q2P0C623 313 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PABPC4LP0CB38 370 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 HSPA1AP0DMV8 641 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 HSPA1BP0DMV9 641 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 THRAP10827 490 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ENO3P13929 434 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CD46P15529 392 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 TSPAN8P19075 237 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 TCN1P20061 433 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 YWHAQP27348 245 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CTGFP29279 349 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CDKN2DP55273 166 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MAXP61244 160 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CDC42EP1Q00587 391 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PFKPQ01813 784 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 RALGDSQ12967 914 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PRKAA1Q13131 559 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SLC12A1Q13621 1099 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CYLC2Q14093 348 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 FLOT2Q14254 428 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PTK2BQ14289 1009 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PTPRNQ16849 979 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MMEL1Q495T6 779 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PCID2Q5JVF3 399 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 C6orf10Q5SRN2 563 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 C6orf52Q5T4I8 152 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PIK3R6Q5UE93 754 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 GDF6Q6KF10 455 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MFN1Q8IWA4 741 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ZNF683Q8IZ20 524 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PGAM4Q8N0Y7 254 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 LINC00528Q8N1L1 170 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MARVELD2Q8N4S9 558 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PCDH20Q8N6Y1 951 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CCNYL1Q8N7R7 359 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 TRPV1Q8NER1 839 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 OR9I1Q8NGQ6 314 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 OR13J1Q8NGT2 312 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 RP9Q8TA86 221 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SPPL2BQ8TCT7 592 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 GTF3C2Q8WUA4 911 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ATP6V1E2Q96A05 226 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SLCO4A1Q96BD0 722 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 MYEOVQ96EZ4 313 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ELMO2Q96JJ3 720 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SCYL1Q96KG9 808 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 C3orf30Q96M34 536 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 HAPLN3Q96S86 360 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 VAT1Q99536 393 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 SLC2A11Q9BYW1 496 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 RBM38Q9H0Z9 239 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PCDHAC1Q9H158 963 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 COPS7BQ9H9Q2 264 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 FBRSL1Q9HCM7 1045 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ATP13A1Q9HD20 1204 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 POLR3BQ9NW08 1133 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 GIMAP2Q9UG22 337 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 FBXO5Q9UKT4 447 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CDH9Q9ULB4 789 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 PRPF19Q9UMS4 504 aaKnown RBP4.35□□□□□ -1.71
SEC22B-202ENST00000618538 CDYLQ9Y232 598 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ANKRD6Q9Y2G4 727 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 ACOT9Q9Y305 439 aa4.35□□□□□ -1.71
SEC22B-202ENST00000618538 FIS1Q9Y3D6 152 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms