RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TMEM181Q9P2C4 612 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 IPO11Q9UI26 975 aaKnown RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 HTRA2O43464 458 aaPredicted RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 TIPRLO75663 272 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 DDNO94850 711 aaPredicted RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 CKMT2P17540 419 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 PAMP19021 973 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 ALDH3B2P48448 385 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 GEMP55040 296 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 ZNF33AQ06730 810 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 NEPROQ6NW34 567 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 DUS3LQ96G46 650 aaKnown RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.53■□□□□ 0.88
NEK3-208ENST00000618534 CROTQ9UKG9 612 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 MYRFQ9Y2G1 1151 aa20.53■□□□□ 0.88
NEK3-208ENST00000618534 TANC1Q9C0D5 1861 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 MBLAC1A4D2B0 266 aaPredicted RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 NRP2O60462 931 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 MAFKO60675 156 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 HLA-DQB2P05538 268 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 SLC7A2P52569 658 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 MYBPC3Q14896 1274 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 CLEC6AQ6EIG7 209 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 PTCD2Q8WV60 388 aaKnown RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 PBXIP1Q96AQ6 731 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 PPWD1Q96BP3 646 aaKnown RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 PPP1R10Q96QC0 940 aaKnown RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 SLC25A23Q9BV35 468 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 LIN28AQ9H9Z2 209 aaKnown RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 MRM3Q9HC36 420 aaKnown RBP20.52■□□□□ 0.88
NEK3-208ENST00000618534 PNPLA3Q9NST1 481 aa20.52■□□□□ 0.88
NEK3-208ENST00000618534 ATP6AP2A0A1C7CYW4 349 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 ATP6AP2O75787 350 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 CCDC166P0CW27 439 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 TSPAN8P19075 237 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 SAMD4BQ5PRF9 694 aaKnown RBP20.52■□□□□ 0.87
NEK3-208ENST00000618534 AGAP9Q5VTM2 703 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 CYHR1Q6ZMK1 362 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 DQX1Q8TE96 717 aaKnown RBP20.52■□□□□ 0.87
NEK3-208ENST00000618534 CCDC126Q96EE4 140 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 RMND5BQ96G75 393 aaPredicted RBP20.52■□□□□ 0.87
NEK3-208ENST00000618534 FBRSL1Q9HCM7 1045 aaKnown RBP20.52■□□□□ 0.87
NEK3-208ENST00000618534 MRGBPQ9NV56 204 aa20.52■□□□□ 0.87
NEK3-208ENST00000618534 MEIS3P2A8K0S8 358 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 UBFD1O14562 309 aaKnown RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 LTA4HP09960 611 aaKnown RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 GJA5P36382 358 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 NDST2P52849 883 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 FAM45BPQ6NSW5 357 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 C8orf82Q6P1X6 216 aaPredicted RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 CCDC117Q8IWD4 279 aaPredicted RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 RIN3Q8TB24 985 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 FAM45AQ8TCE6 357 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 MRGPRX2Q96LB1 330 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 SLC39A8Q9C0K1 460 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 ENTPD7Q9NQZ7 604 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 DUS2Q9NX74 493 aaKnown RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 A0A0J9YVX5 310 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 SOCS2O14508 198 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 EMP3P54852 163 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 CDH15P55291 814 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 ZBTB49Q6ZSB9 765 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 LPCAT2Q7L5N7 544 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 DHFR2Q86XF0 187 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 FIBCD1Q8N539 461 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 ANKRD49Q8WVL7 239 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 RANBP9Q96S59 729 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 EFHD1Q9BUP0 239 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 TSPYL2Q9H2G4 693 aaPredicted RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 GSTO2Q9H4Y5 243 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 SPON1Q9HCB6 807 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 NDFIP2Q9NV92 336 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 TRAF6Q9Y4K3 522 aa20.51■□□□□ 0.87
NEK3-208ENST00000618534 HEMK1Q9Y5R4 338 aaPredicted RBP20.51■□□□□ 0.87
NEK3-208ENST00000618534 MATN3O15232 486 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 ATP6V1B2P21281 511 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 CDK9P50750 372 aaKnown RBP20.5■□□□□ 0.87
NEK3-208ENST00000618534 PCSK7Q16549 785 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 TWF2Q6IBS0 349 aaKnown RBP20.5■□□□□ 0.87
NEK3-208ENST00000618534 CANT1Q8WVQ1 401 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 CDCA5Q96FF9 252 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 ANKRD60Q9BZ19 345 aa20.5■□□□□ 0.87
NEK3-208ENST00000618534 RBM22Q9NW64 420 aaKnown RBP eCLIP20.5■□□□□ 0.87
NEK3-208ENST00000618534 RPL10P27635 214 aaKnown RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 GRIA3P42263 894 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 LHX1P48742 406 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 DCTN2Q13561 401 aaKnown RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 RANBP10Q6VN20 620 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 SMARCD1Q96GM5 515 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 TRIP12Q14669 1992 aaPredicted RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 DYNC1LI2O43237 492 aaPredicted RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 TREHO43280 583 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 AKAP10O43572 662 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 F2P00734 622 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 FAM163BP0C2L3 166 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 NHSL2Q5HYW2 709 aa20.49■□□□□ 0.87
NEK3-208ENST00000618534 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 ERI1Q8IV48 349 aaKnown RBP20.49■□□□□ 0.87
NEK3-208ENST00000618534 FUNDC1Q8IVP5 155 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms