RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 M0QYT0 321 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 SNX2O60749 519 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 ALDH1A2O94788 518 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 STAG3L1P0CL83 205 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CYP2C9P11712 490 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 NFKB1P19838 968 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PSMB9P28065 219 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 HPCAL1P37235 193 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MAGEA3P43357 314 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PTPN9P43378 593 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 NR2C2P49116 596 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 EFNA5P52803 228 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MLLT10P55197 1068 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TAS2R39P59534 338 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 C1QTNF8P60827 252 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 SQLEQ14534 574 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 ZNF846Q147U1 533 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PCSK7Q16549 785 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 RSBN1Q5VWQ0 802 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 ZNF470Q6ECI4 717 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 DHRS4L2Q6PKH6 230 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MPZL3Q6UWV2 235 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 ILDR2Q71H61 639 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CUZD1Q86UP6 607 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 RALGPS2Q86X27 583 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 TERB1Q8NA31 727 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 POC5Q8NA72 575 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TXNDC5Q8NBS9 432 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 RDM1Q8NG50 284 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 OR7A2PQ8NGA2 310 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 OR6P1Q8NGX9 317 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 VPS33AQ96AX1 596 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CDHR1Q96JP9 859 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 KCTD14Q9BQ13 255 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 LHPPQ9H008 270 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TPK1Q9H3S4 243 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 LTB4R2Q9NPC1 389 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TUBA8Q9NY65 449 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 SIX4Q9UIU6 781 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CNOT11Q9UKZ1 510 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 MTF2Q9Y483 593 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 NHSQ6T4R5 1651 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TAF4O00268 1085 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CLASP2O75122 1294 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 DAB1O75553 588 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 ENDOD1O94919 500 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CHEK2O96017 543 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 AHSGP02765 367 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 C8BP07358 591 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MLNP12872 115 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MYF6P23409 242 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CHRNA5P30532 468 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TIE1P35590 1138 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 POLR2IP36954 125 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 CD151P48509 253 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 RABGGTBP53611 331 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PITX1P78337 314 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 CNTN2Q02246 1040 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 FRG1Q14331 258 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 SPCS2Q15005 226 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CCNYL2Q5T2Q4 361 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TMTC4Q5T4D3 741 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PRAMEF18Q5VWM3 479 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TMEM236Q5W0B7 351 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 ZPBP2Q6X784 338 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 FRA10AC1Q70Z53 315 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PAGE2Q7Z2X7 111 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 BNIPLQ7Z465 357 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 PSTKQ8IV42 348 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 DEFB106AQ8N104 65 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 LSMEM2Q8N112 164 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 SPPL2BQ8TCT7 592 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 RNF139Q8WU17 664 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 HEXDCQ8WVB3 486 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 FAM151AQ8WW52 585 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TANKQ92844 425 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 RTP4Q96DX8 246 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TMEM74Q96NL1 305 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 SIK2Q9H0K1 926 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 MTRRQ9UBK8 725 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 EVLQ9UI08 416 aaPredicted RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 TSR3Q9UJK0 312 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 ANAPC2Q9UJX6 822 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 CPSF3Q9UKF6 684 aaKnown RBP6.71□□□□□ -1.34
LMO3-235ENST00000616247 ADAM28Q9UKQ2 775 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TMEM98Q9Y2Y6 226 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 NDUFAF1Q9Y375 327 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 STYXL1Q9Y6J8 313 aa6.71□□□□□ -1.34
LMO3-235ENST00000616247 A0A087WZ62 844 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 NME4O00746 187 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 NOBOXO60393 691 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 MSCO60682 206 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 STBD1O95210 358 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 KRT8P05787 483 aa6.7□□□□□ -1.34
LMO3-235ENST00000616247 MMP10P09238 476 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms